FFCP PHASE1:Hg19::chr16:86985410..86985422,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:86985410..86985422,- | |||
|description=CAGE_peak_at_chr16:86985410..86985422,- | |description=CAGE_peak_at_chr16:86985410..86985422,- | ||
|id=chr16:86985410..86985422,- | |id=chr16:86985410..86985422,- | ||
|ontology_enrichment_celltype=CL:0000055!4.23e-17!180;CL:0000057!4.59e-11!75;CL:0002551!2.75e-09!6;CL:0000144!1.67e-08!625;CL:0002371!2.86e-08!591 | |ontology_enrichment_celltype=CL:0000055!4.23e-17!180;CL:0000057!4.59e-11!75;CL:0002551!2.75e-09!6;CL:0000144!1.67e-08!625;CL:0002371!2.86e-08!591 | ||
|ontology_enrichment_celltype_v019=CL:0002552;3.34e-23;5!CL:0000515;1.45e-17;3!CL:0002591;1.25e-13;1!CL:0000056;2.01e-13;4!CL:0000680;4.66e-08;7!CL:0002363;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,4.70e-23,5;CL:0002591,1.61e-13,1;CL:0000515,2.08e-13,4;CL:0000057,2.03e-07,76;CL:0002363,2.40e-07,2;CL:0000008,2.40e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;2.01e-13;4!CL:0000008;1.87e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.25e-13;1!DOID:201;3.86e-09;6!DOID:0060100;3.86e-09;6!DOID:4231;1.87e-07;2!DOID:1907;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.10e-13,1;DOID:201,3.86e-09,6;DOID:0060100,3.86e-09,6;DOID:4231,1.99e-07,2;DOID:1907,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.10e-11!83;UBERON:0002329!1.10e-11!83;UBERON:0003077!1.10e-11!83;UBERON:0003059!1.10e-11!83;UBERON:0007282!1.10e-11!83;UBERON:0009618!1.10e-11!83;UBERON:0007285!1.10e-11!83;UBERON:0005256!2.14e-07!143;UBERON:0004290!2.56e-07!70;UBERON:0000075!3.68e-07!13;UBERON:0005944!3.68e-07!13;UBERON:0004288!3.68e-07!13;UBERON:0003089!3.68e-07!13;UBERON:0002203!4.90e-07!6;UBERON:0001768!4.90e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;9.43e-15;8!UBERON:0007195;3.08e-14;1!UBERON:0003729;2.68e-09;13!UBERON:0000165;1.86e-07;28!UBERON:0003566;1.87e-07;2!UBERON:0000078;1.87e-07;2!UBERON:0001777;1.87e-07;2!UBERON:0002012;1.87e-07;2!UBERON:0008886;1.87e-07;2!UBERON:0001474;7.30e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.16e-14,8;UBERON:0007195,3.08e-14,1;UBERON:0003729,3.04e-09,13;UBERON:0000033,1.20e-07,56;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2;UBERON:0003566,2.40e-07,2;UBERON:0001777,2.40e-07,2;UBERON:0003102,3.47e-07,99;UBERON:0000165,3.58e-07,29;UBERON:0000930,3.58e-07,29;UBERON:0000153,7.17e-07,62;UBERON:0007811,7.17e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0.886917589850256,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.74000264525148,0,0.269421344139376,0,0,0,0,1.5608003841516,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,4.08308342509786,1.10550885580591,2.16984140469107,0,0,0,0,0.673344455816265,0.750711119231785,3.87889761677856,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.2933531432838,0.129271715757778,0,0,0,0,0.257207374262142,2.83698264046557,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,2.31650090668127,0.821905290201534,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0.355123450626254,0.492762936082855,0,0.929683027679674,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0.0898683511473268,0,0,0.0986434056369336,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.992975867626496,1.88359751044335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.298509605773748,0,0,0.757612021100357,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0.214821114084977,0,0,2.40016658797892,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.378139268656271,0.886917589850256,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.74000264525148,0,0.269421344139376,0,0,0,0,1.5608003841516,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,4.08308342509786,1.10550885580591,2.16984140469107,0,0,0,0,0.673344455816265,0.750711119231785,3.87889761677856,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.2933531432838,0.129271715757778,0,0,0,0,0.257207374262142,2.83698264046557,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,2.31650090668127,0.821905290201534,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0.355123450626254,0.492762936082855,0,0.929683027679674,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0.511343412510774,0,0,0.0898683511473268,0,0,0.0986434056369336,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.992975867626496,1.88359751044335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.298509605773748,0,0,0.757612021100357,0,0,0,0.151230923763239,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0.214821114084977,0,0,2.40016658797892,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:86985410..86985422,- | |short_description=p@chr16:86985410..86985422,- | ||
}} | }} |
Latest revision as of 13:08, 25 July 2015
Short description: | p@chr16:86985410..86985422, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86985410..86985422, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 4.70e-23 | 5 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |
skeletal muscle myoblast | 2.08e-13 | 4 |
fibroblast | 2.03e-07 | 76 |
keratocyte | 2.40e-07 | 2 |
migratory cranial neural crest cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 1.16e-14 | 8 |
stroma of bone marrow | 3.08e-14 | 1 |
mouth mucosa | 3.04e-09 | 13 |
head | 1.20e-07 | 56 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.12e-07 | 2 |
developing epithelial placode | 2.12e-07 | 2 |
respiratory system arterial blood vessel | 2.12e-07 | 2 |
respiratory system blood vessel | 2.12e-07 | 2 |
respiratory system artery | 2.12e-07 | 2 |
head blood vessel | 2.12e-07 | 2 |
pulmonary artery | 2.12e-07 | 2 |
pulmonary vascular system | 2.12e-07 | 2 |
pharyngeal vasculature | 2.12e-07 | 2 |
truncus arteriosus | 2.12e-07 | 2 |
aortic sac | 2.12e-07 | 2 |
pharyngeal arch artery | 2.12e-07 | 2 |
head connective tissue | 2.40e-07 | 2 |
substantia propria of cornea | 2.40e-07 | 2 |
surface structure | 3.47e-07 | 99 |
mouth | 3.58e-07 | 29 |
stomodeum | 3.58e-07 | 29 |
anterior region of body | 7.17e-07 | 62 |
craniocervical region | 7.17e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.10e-13 | 1 |
connective tissue cancer | 3.86e-09 | 6 |
musculoskeletal system cancer | 3.86e-09 | 6 |
histiocytoma | 1.99e-07 | 2 |
malignant fibroxanthoma | 1.99e-07 | 2 |