FFCP PHASE1:Hg19::chr16:88836119..88836138,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:88836119..88836138,- | |||
|description=CAGE_peak_at_chr16:88836119..88836138,- | |description=CAGE_peak_at_chr16:88836119..88836138,- | ||
|id=chr16:88836119..88836138,- | |id=chr16:88836119..88836138,- | ||
|ontology_enrichment_celltype=CL:1000497!2.29e-08!18;CL:0002518!2.29e-08!18;CL:1000449!3.16e-07!16 | |ontology_enrichment_celltype=CL:1000497!2.29e-08!18;CL:0002518!2.29e-08!18;CL:1000449!3.16e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.87e-16;19!CL:1000746;1.39e-09;7!CL:1000612;1.39e-09;7!CL:0002586;1.69e-09;3!CL:0002541;3.93e-09;3!CL:1000497;4.88e-09;17!CL:0002518;4.88e-09;17!CL:0000064;2.60e-08;3!CL:0000067;2.60e-08;3!CL:0005012;2.60e-08;3!CL:0002304;2.60e-08;3!CL:1000449;4.17e-08;15!CL:0000149;3.33e-07;4!CL:0000669;6.01e-07;4!CL:0000650;6.14e-07;2!CL:1000500;6.14e-07;2!CL:1000618;6.14e-07;2!CL:1001318;6.14e-07;2!CL:0002173;6.14e-07;2 | |ontology_enrichment_celltype_v019=CL:0000349;4.87e-16;19!CL:1000746;1.39e-09;7!CL:1000612;1.39e-09;7!CL:0002586;1.69e-09;3!CL:0002541;3.93e-09;3!CL:1000497;4.88e-09;17!CL:0002518;4.88e-09;17!CL:0000064;2.60e-08;3!CL:0000067;2.60e-08;3!CL:0005012;2.60e-08;3!CL:0002304;2.60e-08;3!CL:1000449;4.17e-08;15!CL:0000149;3.33e-07;4!CL:0000669;6.01e-07;4!CL:0000650;6.14e-07;2!CL:1000500;6.14e-07;2!CL:1000618;6.14e-07;2!CL:1001318;6.14e-07;2!CL:0002173;6.14e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.60e-16,19;CL:0002586,1.19e-09,3;CL:1000746,1.85e-09,7;CL:1000612,1.85e-09,7;CL:0002541,3.30e-09,3;CL:1000497,5.78e-09,17;CL:0002518,5.78e-09,17;CL:1000449,4.90e-08,15;CL:0000064,5.91e-08,3;CL:0000067,5.91e-08,3;CL:0005012,5.91e-08,3;CL:0002304,5.91e-08,3;CL:0000149,2.58e-07,4;CL:0000669,5.02e-07,4;CL:0000650,6.26e-07,2;CL:1000500,6.26e-07,2;CL:1000618,6.26e-07,2;CL:1001318,6.26e-07,2;CL:0002173,6.26e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;3.00e-07;4!DOID:1612;3.00e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;3.00e-07;4!DOID:1612;3.00e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.98e-07,4;DOID:1612,2.98e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.74e-10!27;UBERON:0003918!1.74e-10!27;UBERON:0005095!1.74e-10!27;UBERON:0007687!1.74e-10!27;UBERON:0005631!2.19e-10!14;UBERON:0000158!2.19e-10!14;UBERON:0000489!8.11e-10!32;UBERON:0000058!3.35e-09!26;UBERON:0003887!4.93e-09!21;UBERON:0004876!6.38e-09!20;UBERON:0000080!7.94e-09!18;UBERON:0002120!7.94e-09!18;UBERON:0004875!7.94e-09!18;UBERON:0005721!7.94e-09!18;UBERON:0005754!7.94e-09!18;UBERON:0007297!7.94e-09!18;UBERON:0000464!4.96e-08!104;UBERON:0006555!6.27e-08!17;UBERON:0005103!6.27e-08!17;UBERON:0000083!6.27e-08!17;UBERON:0009201!6.27e-08!17;UBERON:0004819!6.27e-08!17;UBERON:0006553!6.27e-08!17;UBERON:0003074!6.27e-08!17;UBERON:0003060!6.27e-08!17;UBERON:0002553!3.09e-07!70;UBERON:0004211!3.16e-07!16;UBERON:0001285!3.16e-07!16;UBERON:0007684!3.16e-07!16;UBERON:0003220!3.16e-07!16;UBERON:0004208!3.16e-07!16;UBERON:0001008!3.89e-07!45;UBERON:0000966!9.67e-07!5;UBERON:0005388!9.67e-07!5;UBERON:0001802!9.67e-07!5 | |ontology_enrichment_uberon=UBERON:0002113!1.74e-10!27;UBERON:0003918!1.74e-10!27;UBERON:0005095!1.74e-10!27;UBERON:0007687!1.74e-10!27;UBERON:0005631!2.19e-10!14;UBERON:0000158!2.19e-10!14;UBERON:0000489!8.11e-10!32;UBERON:0000058!3.35e-09!26;UBERON:0003887!4.93e-09!21;UBERON:0004876!6.38e-09!20;UBERON:0000080!7.94e-09!18;UBERON:0002120!7.94e-09!18;UBERON:0004875!7.94e-09!18;UBERON:0005721!7.94e-09!18;UBERON:0005754!7.94e-09!18;UBERON:0007297!7.94e-09!18;UBERON:0000464!4.96e-08!104;UBERON:0006555!6.27e-08!17;UBERON:0005103!6.27e-08!17;UBERON:0000083!6.27e-08!17;UBERON:0009201!6.27e-08!17;UBERON:0004819!6.27e-08!17;UBERON:0006553!6.27e-08!17;UBERON:0003074!6.27e-08!17;UBERON:0003060!6.27e-08!17;UBERON:0002553!3.09e-07!70;UBERON:0004211!3.16e-07!16;UBERON:0001285!3.16e-07!16;UBERON:0007684!3.16e-07!16;UBERON:0003220!3.16e-07!16;UBERON:0004208!3.16e-07!16;UBERON:0001008!3.89e-07!45;UBERON:0000966!9.67e-07!5;UBERON:0005388!9.67e-07!5;UBERON:0001802!9.67e-07!5 | ||
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|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,1.39560233594486,3.05817920982241,2.11013582582763,0.37129905888014,0.331397375727916,0,0,0,0,0.492484232307152,0.612002073732759,0,0,0.410623275218653,0.125542639594803,0,0,0.236132343941038,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.289693037921647,0,1.94653948121054,1.13441780596881,1.33037638477538,1.14185221401064,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0.760272105718513,1.70843440283719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.609868530647977,0.132529768321485,0.580969714347592,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0.231860809950154,0.117408694235822,0,0,0,5.53143078571493,5.15091697256924,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0,1.76221041716467,0,0,0,0,5.15316871458641,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.462092022626489,4.70609861506113,0,2.32213583564327,1.13733384070897,0,0.215915916102139,1.54227252690289,3.25135725052623,7.02365683396795,0,0.831076008928724,0.895499018888713,0,0,1.79515087581472,21.6489666161806,10.737487023922,0.618246069886334,0.366277859273374,0.41254749960294,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0231488364082,12.7694812758035,18.4296421259539,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0,8.77203755910485,0,0.789147245095469,0,0,0,0,0,3.38556089410803,0,0.724999575434793,0,4.57656570526979,0.236387681767936,0.344743373241465,0,0.347249989866585,0,0,0,1.65868889896837,0.886642856860642,1.31631238292384,0.435753854075961,0,0.153900517007594,0,8.30030055797016,3.32103284316157,27.379137724346,6.38002319463839,1.55715908783166,3.73124343213044,0,0.784901281975124,0.166211681900156,0.902382642468723,1.56850027454192,0.671286347903371,0.948768663620925,0,0.210998064528027,0.163232808159148,0,0,0,0.884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,6.31335044559025,1.20990716048664,0,0.821425535170343,0.150323419414493,0,0.664653872707185,0,0.313932918407225,0,1.13843818411917,0,0.173559738335131,0.0979923974143777,0,1.04836000945218,0,0,0,0,0.484945082442097,0,3.16373037092745,0,0,0,4.88878456837007,0.160317640503067,0.213452994739353,0.39961921916426,0,0,0,0,0,0.235694034616795,0.67952103036807,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.412618309791701,0.415440338029185,0,0.77380195455795,0,0,1.41850273138557,2.57027481861491,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0.704815022316672,2.24253566392159,1.10043013569766,1.65695622138878,1.48849806543585,0,0,0,0.544017803369474,0,0.612691153526923,0.327872630709804,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,1.93688088910723,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79369063011563,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0.397832444232549,0.451261970095544,0,0,5.76194727859129,0,0.295712172434091,0,0,0,0,0,0,1.98484471355718,0,0.638812138197976,20.8923715992532,42.7080327217906,0,0.227662191351298,2.57236873471653,0,0,0,0,0.354581522651905,0,0.627944742804112,0,1.12108865325516,0.913158720509496,0.215927591218621,1.43325506366115,4.07416301806941,15.3273203380745,9.29931402945002,0,0,0.207216164163037,0,0.691259661814092,2.15113679410139,0,0,8.46774100381858,0,0,0,2.01339777236026,0,0.243835849964539,0,0.410651227424988,0,1.94284397223656,0,0.198950775161368,0,0,1.20934568419972,0,0.154348316215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| ||
|short_description=p@chr16:88836119..88836138,- | |short_description=p@chr16:88836119..88836138,- | ||
}} | }} |
Latest revision as of 13:22, 25 July 2015
Short description: | p@chr16:88836119..88836138, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:88836119..88836138, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.60e-16 | 19 |
retinal pigment epithelial cell | 1.19e-09 | 3 |
glomerular cell | 1.85e-09 | 7 |
kidney corpuscule cell | 1.85e-09 | 7 |
chorionic membrane mesenchymal stem cell | 3.30e-09 | 3 |
kidney cell | 5.78e-09 | 17 |
kidney epithelial cell | 5.78e-09 | 17 |
epithelial cell of nephron | 4.90e-08 | 15 |
ciliated cell | 5.91e-08 | 3 |
ciliated epithelial cell | 5.91e-08 | 3 |
multi-ciliated epithelial cell | 5.91e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.91e-08 | 3 |
visual pigment cell | 2.58e-07 | 4 |
pericyte cell | 5.02e-07 | 4 |
mesangial cell | 6.26e-07 | 2 |
kidney interstitial cell | 6.26e-07 | 2 |
juxtaglomerular complex cell | 6.26e-07 | 2 |
renal interstitial pericyte | 6.26e-07 | 2 |
extraglomerular mesangial cell | 6.26e-07 | 2 |
Ontology term | p-value | n |
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