FFCP PHASE1:Hg19::chr17:19289755..19289772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:19289755..19289772,- | |||
|coexpression_cluster_id=C1430 | |||
|description=CAGE_peak_at_chr17:19289755..19289772,- | |description=CAGE_peak_at_chr17:19289755..19289772,- | ||
|id=chr17:19289755..19289772,- | |id=chr17:19289755..19289772,- | ||
|ontology_enrichment_celltype=CL:0000057!2.72e-09!75;CL:0000055!1.88e-07!180 | |ontology_enrichment_celltype=CL:0000057!2.72e-09!75;CL:0000055!1.88e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002549;1.10e-10;2!CL:0000632;9.30e-08;3!CL:0002564;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.05e-10,2;CL:0000632,1.18e-07,3;CL:0002564,2.20e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.49e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;1.65e-16;5!UBERON:0005423;1.65e-16;5!UBERON:0002346;3.16e-12;4!UBERON:0000923;3.16e-12;4!UBERON:0010316;3.16e-12;4!UBERON:0005291;3.16e-12;4!UBERON:0005629;1.10e-10;2!UBERON:0005358;1.10e-10;2!UBERON:0001886;1.10e-10;2!UBERON:0005406;1.10e-10;2!UBERON:0004086;1.10e-10;2!UBERON:0005282;1.10e-10;2!UBERON:0005281;1.10e-10;2!UBERON:0002242;2.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,4.75e-11,2;UBERON:0005629,1.05e-10,2;UBERON:0005358,1.05e-10,2;UBERON:0001886,1.05e-10,2;UBERON:0004086,1.05e-10,2;UBERON:0005282,1.05e-10,2;UBERON:0005281,1.05e-10,2;UBERON:0002242,2.20e-07,3;UBERON:0003068,2.20e-07,3;UBERON:0002328,2.20e-07,3;UBERON:0004880,2.20e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.704772020479856,0,3.5756887554183,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0.443458794925128,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,2.86836620748814,0,0,0,0,1.24484414159907,0,0,1.21085942115945,1.72852777344,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0.37223371266318,0.337552664482532,0.68205903612839,0.252433774244115,0.828449087780694,0.484938170456436,0.355009592516614,0.302256294682921,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.714889968290738,1.62786481617433,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.50051156317903,0.271265023699736,0.831883446123229,0.892144943985809,0,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.587403472388222,1.37257369524342,0,0.215714200818617,0,0,0,0,0.496215615637554,0.153461973288062,1.40330047216537,0.256278298511402,0,1.28683136914886,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.803701137152247,0.910455840033585,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,2.1396949401696,0,0,0.359744915166629,2.19629623788844,0.589062011728432,0,0,0,0.48763373908959,0,0,0.682499557039929,0.989838023675989,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.98871982376605,1.10513566212459,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.916641696046735,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,1.38823636338003,0.314408610199332,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0.144921028610825,0.597019211547496,0.233713309847224,0,0,0,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0.450772826991655,0,0,0,0,0,0,0,1.71697852591396,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0.629063767423586,0.218419276384028,0.169732529954025,3.61377364172861,3.59413716351106,0,0.318004350653419,0,0,2.82140754952547,1.2249819094128,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,1.93458368795583,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.313972371402056,0,0,1.82631744101899,0,0,0.714765441766563,0.158013611732727,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0.980593287015622,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.1161073620616,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,1.27940389140589,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0.342233301085281,0,0.143444410785353,0.99798106963804,0,0,0,0,4.69281884806909,0.366724332548599,1.22068853494722,1.3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| |phase1_expression=0.181678379270557,0.428201047781966,0.704772020479856,0,3.5756887554183,1.74467704820074,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0.443458794925128,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0,2.86836620748814,0,0,0,0,1.24484414159907,0,0,1.21085942115945,1.72852777344,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.640672166455702,0.211931901159562,0,0.206105058476878,0,0.37223371266318,0.337552664482532,0.68205903612839,0.252433774244115,0.828449087780694,0.484938170456436,0.355009592516614,0.302256294682921,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,4.41026134156626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.714889968290738,1.62786481617433,0.823240336780769,0,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.50051156317903,0.271265023699736,0.831883446123229,0.892144943985809,0,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.587403472388222,1.37257369524342,0,0.215714200818617,0,0,0,0,0.496215615637554,0.153461973288062,1.40330047216537,0.256278298511402,0,1.28683136914886,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.803701137152247,0.910455840033585,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,2.1396949401696,0,0,0.359744915166629,2.19629623788844,0.589062011728432,0,0,0,0.48763373908959,0,0,0.682499557039929,0.989838023675989,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.98871982376605,1.10513566212459,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.126621591911757,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.916641696046735,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,1.38823636338003,0.314408610199332,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0.144921028610825,0.597019211547496,0.233713309847224,0,0,0,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0.450772826991655,0,0,0,0,0,0,0,1.71697852591396,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0.629063767423586,0.218419276384028,0.169732529954025,3.61377364172861,3.59413716351106,0,0.318004350653419,0,0,2.82140754952547,1.2249819094128,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,1.93458368795583,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.313972371402056,0,0,1.82631744101899,0,0,0.714765441766563,0.158013611732727,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0.980593287015622,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.1161073620616,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,1.27940389140589,0,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0.342233301085281,0,0.143444410785353,0.99798106963804,0,0,0,0,4.69281884806909,0.366724332548599,1.22068853494722,1.33151354837103,1.40891655513718,0 | ||
|short_description=p@chr17:19289755..19289772,- | |short_description=p@chr17:19289755..19289772,- | ||
}} | }} |
Latest revision as of 14:31, 25 July 2015
Short description: | p@chr17:19289755..19289772, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:19289755..19289772, - |
Coexpression cluster: | C1430_neuroectodermal_aorta_Hepatic_Adipocyte_Osteoblast_normal_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.05e-10 | 2 |
hepatic stellate cell | 1.18e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 2.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 4.75e-11 | 2 |
vascular plexus | 1.05e-10 | 2 |
ventricle of nervous system | 1.05e-10 | 2 |
choroid plexus | 1.05e-10 | 2 |
brain ventricle | 1.05e-10 | 2 |
ventricular system of brain | 1.05e-10 | 2 |
ventricular system of central nervous system | 1.05e-10 | 2 |
nucleus pulposus | 2.20e-07 | 3 |
axial mesoderm | 2.20e-07 | 3 |
notochord | 2.20e-07 | 3 |
chordamesoderm | 2.20e-07 | 3 |