FFCP PHASE1:Hg19::chr17:28539815..28539831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:28539815..28539831,- | |||
|coexpression_cluster_id=C342 | |coexpression_cluster_id=C342 | ||
|description=CAGE_peak_at_chr17:28539815..28539831,- | |description=CAGE_peak_at_chr17:28539815..28539831,- | ||
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|ontology_enrichment_celltype=CL:0000945!3.35e-25!24;CL:0000826!3.35e-25!24;CL:0000080!4.65e-19!6;CL:0000838!1.52e-18!52;CL:0000542!3.55e-18!53;CL:0000051!3.55e-18!53;CL:0000946!5.85e-14!1;CL:0000786!5.85e-14!1;CL:0000980!5.85e-14!1;CL:0000988!2.61e-08!182;CL:0000785!1.28e-07!2;CL:0000955!1.28e-07!2;CL:0000818!1.28e-07!2;CL:0000954!1.28e-07!2;CL:0000816!1.28e-07!2;CL:0002087!1.90e-07!119;CL:0002031!4.18e-07!124 | |ontology_enrichment_celltype=CL:0000945!3.35e-25!24;CL:0000826!3.35e-25!24;CL:0000080!4.65e-19!6;CL:0000838!1.52e-18!52;CL:0000542!3.55e-18!53;CL:0000051!3.55e-18!53;CL:0000946!5.85e-14!1;CL:0000786!5.85e-14!1;CL:0000980!5.85e-14!1;CL:0000988!2.61e-08!182;CL:0000785!1.28e-07!2;CL:0000955!1.28e-07!2;CL:0000818!1.28e-07!2;CL:0000954!1.28e-07!2;CL:0000816!1.28e-07!2;CL:0002087!1.90e-07!119;CL:0002031!4.18e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.48e-42;24!CL:0000946;3.16e-29;1!CL:0000786;3.16e-29;1!CL:0000542;5.95e-09;53 | |ontology_enrichment_celltype_v019=CL:0000945;2.48e-42;24!CL:0000946;3.16e-29;1!CL:0000786;3.16e-29;1!CL:0000542;5.95e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.48e-42,24;CL:0000826,2.48e-42,24;CL:0000946,3.16e-29,1;CL:0000786,3.16e-29,1;CL:0000980,3.16e-29,1;CL:0000838,8.94e-20,52;CL:0000542,2.08e-19,53;CL:0000051,2.08e-19,53;CL:0000785,2.37e-15,2;CL:0000955,2.37e-15,2;CL:0000818,2.37e-15,2;CL:0000954,2.37e-15,2;CL:0000816,2.37e-15,2;CL:0000817,1.09e-10,3;CL:0002087,5.30e-09,115;CL:0002031,1.23e-08,120;CL:0000738,1.21e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;2.37e-15;2!CL:0000051;5.95e-09;53 | |ontology_enrichment_development_v019=CL:0000954;2.37e-15;2!CL:0000051;5.95e-09;53 | ||
|ontology_enrichment_disease=DOID:630!3.08e-14!1;DOID:0050177!3.08e-14!1;DOID:0050427!3.08e-14!1;DOID:2355!7.55e-14!1;DOID:0060060!9.73e-14!1;DOID:0060061!9.73e-14!1;DOID:8691!9.73e-14!1;DOID:0060058!6.50e-12!10;DOID:74!1.45e-07!2 | |ontology_enrichment_disease=DOID:630!3.08e-14!1;DOID:0050177!3.08e-14!1;DOID:0050427!3.08e-14!1;DOID:2355!7.55e-14!1;DOID:0060060!9.73e-14!1;DOID:0060061!9.73e-14!1;DOID:8691!9.73e-14!1;DOID:0060058!6.50e-12!10;DOID:74!1.45e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:630;7.48e-30;1!DOID:0050177;7.48e-30;1!DOID:0050427;7.48e-30;1 | |ontology_enrichment_disease_v019=DOID:630;7.48e-30;1!DOID:0050177;7.48e-30;1!DOID:0050427;7.48e-30;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,7.48e-30,1;DOID:0050177,7.48e-30,1;DOID:0050427,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!1.09e-11!10;UBERON:0000358!1.09e-11!10;UBERON:0000307!1.09e-11!10;UBERON:0000091!1.09e-11!10;UBERON:0000087!1.09e-11!10;UBERON:0007806!1.09e-11!10;UBERON:0008780!1.09e-11!10;UBERON:0005728!1.09e-11!10;UBERON:0000178!5.65e-08!15;UBERON:0000179!5.65e-08!15;UBERON:0000463!5.65e-08!15;UBERON:0002148!1.87e-07!2;UBERON:0009662!1.87e-07!2 | |ontology_enrichment_uberon=UBERON:0002331!1.09e-11!10;UBERON:0000358!1.09e-11!10;UBERON:0000307!1.09e-11!10;UBERON:0000091!1.09e-11!10;UBERON:0000087!1.09e-11!10;UBERON:0007806!1.09e-11!10;UBERON:0008780!1.09e-11!10;UBERON:0005728!1.09e-11!10;UBERON:0000178!5.65e-08!15;UBERON:0000179!5.65e-08!15;UBERON:0000463!5.65e-08!15;UBERON:0002148!1.87e-07!2;UBERON:0009662!1.87e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.42e-11;3!UBERON:0004177;5.08e-07;5!UBERON:0005057;5.08e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;7.42e-11;3!UBERON:0004177;5.08e-07;5!UBERON:0005057;5.08e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.42e-11,3;UBERON:0004854,7.42e-11,3;UBERON:0009034,7.42e-11,3;UBERON:0002095,7.42e-11,3;UBERON:0004782,7.42e-11,3;UBERON:0003281,7.42e-11,3;UBERON:0009664,7.42e-11,3;UBERON:0002296,7.42e-11,3;UBERON:0005602,7.42e-11,3;UBERON:0001179,7.42e-11,3;UBERON:0006293,7.42e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32906122652669,5.99334302984604,6.4542840677217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6931152432167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0284246151616 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.32906122652669,5.99334302984604,6.4542840677217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6931152432167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0284246151616 | ||
|short_description=p@chr17:28539815..28539831,- | |short_description=p@chr17:28539815..28539831,- | ||
}} | }} |
Latest revision as of 15:14, 25 July 2015
Short description: | p@chr17:28539815..28539831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:28539815..28539831, - |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.48e-42 | 24 |
pro-B cell | 2.48e-42 | 24 |
antibody secreting cell | 3.16e-29 | 1 |
plasma cell | 3.16e-29 | 1 |
plasmablast | 3.16e-29 | 1 |
lymphoid lineage restricted progenitor cell | 8.94e-20 | 52 |
lymphocyte | 2.08e-19 | 53 |
common lymphoid progenitor | 2.08e-19 | 53 |
mature B cell | 2.37e-15 | 2 |
pre-B-II cell | 2.37e-15 | 2 |
transitional stage B cell | 2.37e-15 | 2 |
small pre-B-II cell | 2.37e-15 | 2 |
immature B cell | 2.37e-15 | 2 |
precursor B cell | 1.09e-10 | 3 |
nongranular leukocyte | 5.30e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.23e-08 | 120 |
leukocyte | 1.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.42e-11 | 3 |
gastrointestinal system mesentery | 7.42e-11 | 3 |
stomach region | 7.42e-11 | 3 |
mesentery | 7.42e-11 | 3 |
gastrointestinal system serosa | 7.42e-11 | 3 |
mesentery of stomach | 7.42e-11 | 3 |
gut mesentery | 7.42e-11 | 3 |
dorsal mesentery | 7.42e-11 | 3 |
dorsal mesogastrium | 7.42e-11 | 3 |
peritoneal cavity | 7.42e-11 | 3 |
spleen primordium | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.48e-30 | 1 |
monogenic disease | 7.48e-30 | 1 |
xeroderma pigmentosum | 7.48e-30 | 1 |