FFCP PHASE1:Hg19::chr17:34401981..34401994,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:34401981..34401994,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr17:34401981..34401994,+ | |||
|id=chr17:34401981..34401994,+ | |||
|ontology_enrichment_celltype=CL:0000623!3.22e-15!3;CL:0000825!3.22e-15!3;CL:0000625!2.97e-14!11;CL:0000842!4.12e-14!3;CL:0000738!1.04e-12!140;CL:0002087!1.60e-11!119;CL:0000791!1.75e-11!18;CL:0000789!1.75e-11!18;CL:0002420!1.75e-11!18;CL:0002419!1.75e-11!18;CL:0000790!1.75e-11!18;CL:0000224!1.06e-10!4;CL:0000838!5.13e-10!52;CL:0000542!8.83e-10!53;CL:0000051!8.83e-10!53;CL:0000037!2.40e-09!172;CL:0000566!2.40e-09!172;CL:0000988!1.53e-08!182;CL:0002031!1.60e-08!124;CL:0000084!5.44e-08!25;CL:0000827!5.44e-08!25;CL:0000767!2.75e-07!3;CL:0000080!2.84e-07!6;CL:0002032!4.42e-07!165;CL:0000837!4.42e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.48e-118;3!CL:0002127;2.21e-40;1!CL:0000911;2.21e-40;1!CL:0000814;2.21e-40;1!CL:0000767;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.33e-118,3;CL:0000825,2.33e-118,3;CL:0002127,3.30e-40,1;CL:0000914,3.30e-40,1;CL:0000911,3.30e-40,1;CL:0000814,3.30e-40,1;CL:0002042,3.30e-40,1;CL:0002039,3.30e-40,1;CL:0002040,3.30e-40,1;CL:0002041,3.30e-40,1;CL:0000893,6.96e-21,2;CL:0002489,6.96e-21,2;CL:0000809,6.96e-21,2;CL:0000808,6.96e-21,2;CL:0000894,6.96e-21,2;CL:0000806,6.96e-21,2;CL:0000807,6.96e-21,2;CL:0000805,6.96e-21,2;CL:0002425,6.96e-21,2;CL:0000767,1.83e-14,3;CL:0000838,7.03e-13,52;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002425;5.69e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.75e-10!7;UBERON:0001042!4.88e-07!10;UBERON:0009145!4.88e-07!10;UBERON:0002106!7.83e-07!3;UBERON:0004854!7.83e-07!3;UBERON:0009034!7.83e-07!3;UBERON:0002095!7.83e-07!3;UBERON:0004782!7.83e-07!3;UBERON:0003281!7.83e-07!3;UBERON:0009664!7.83e-07!3;UBERON:0002296!7.83e-07!3;UBERON:0005602!7.83e-07!3;UBERON:0001179!7.83e-07!3;UBERON:0006293!7.83e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.79e-11,4;UBERON:0005058,3.79e-11,4;UBERON:0009113,3.79e-11,4;UBERON:0003295,3.79e-11,4;UBERON:0005562,3.79e-11,4;UBERON:0003351,7.25e-08,6;UBERON:0004177,6.39e-07,7;UBERON:0005057,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.786728553697808,1.53531759238885,0,0,0,0,0,0,0,0,0.200544447470142,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0.453237370790265,0,0,0,0,0,0.950452044448374,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,1.57624608161542,2.58753089831421,6.93052395910641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:34401981..34401994,+ | |||
}} |
Latest revision as of 15:45, 25 July 2015
Short description: | p@chr17:34401981..34401994, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:34401981..34401994, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.33e-118 | 3 |
pro-NK cell | 2.33e-118 | 3 |
innate effector T cell | 3.30e-40 | 1 |
immature NK T cell | 3.30e-40 | 1 |
effector T cell | 3.30e-40 | 1 |
mature NK T cell | 3.30e-40 | 1 |
immature NK T cell stage IV | 3.30e-40 | 1 |
immature NK T cell stage I | 3.30e-40 | 1 |
immature NK T cell stage II | 3.30e-40 | 1 |
immature NK T cell stage III | 3.30e-40 | 1 |
thymocyte | 6.96e-21 | 2 |
double negative thymocyte | 6.96e-21 | 2 |
double-positive, alpha-beta thymocyte | 6.96e-21 | 2 |
DN4 thymocyte | 6.96e-21 | 2 |
DN1 thymic pro-T cell | 6.96e-21 | 2 |
DN2 thymocyte | 6.96e-21 | 2 |
DN3 thymocyte | 6.96e-21 | 2 |
immature single positive thymocyte | 6.96e-21 | 2 |
early T lineage precursor | 6.96e-21 | 2 |
basophil | 1.83e-14 | 3 |
lymphoid lineage restricted progenitor cell | 7.03e-13 | 52 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.79e-11 | 4 |
hemolymphoid system gland | 3.79e-11 | 4 |
thymic region | 3.79e-11 | 4 |
pharyngeal gland | 3.79e-11 | 4 |
thymus primordium | 3.79e-11 | 4 |
pharyngeal epithelium | 7.25e-08 | 6 |
hemopoietic organ | 6.39e-07 | 7 |
immune organ | 6.39e-07 | 7 |