FFCP PHASE1:Hg19::chr17:36656632..36656663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:36656632..36656663,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr17:36656632..36656663,+ | |description=CAGE_peak_at_chr17:36656632..36656663,+ | ||
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|ontology_enrichment_celltype=CL:0002127!8.95e-11!1;CL:0000914!8.95e-11!1;CL:0000911!8.95e-11!1;CL:0000814!8.95e-11!1;CL:0002042!8.95e-11!1;CL:0002039!8.95e-11!1;CL:0002040!8.95e-11!1;CL:0002041!8.95e-11!1;CL:0002616!9.84e-11!1 | |ontology_enrichment_celltype=CL:0002127!8.95e-11!1;CL:0000914!8.95e-11!1;CL:0000911!8.95e-11!1;CL:0000814!8.95e-11!1;CL:0002042!8.95e-11!1;CL:0002039!8.95e-11!1;CL:0002040!8.95e-11!1;CL:0002041!8.95e-11!1;CL:0002616!9.84e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;6.58e-50;1!CL:0000911;6.58e-50;1!CL:0000814;6.58e-50;1 | |ontology_enrichment_celltype_v019=CL:0002127;6.58e-50;1!CL:0000911;6.58e-50;1!CL:0000814;6.58e-50;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.58e-50,1;CL:0000914,6.58e-50,1;CL:0000911,6.58e-50,1;CL:0000814,6.58e-50,1;CL:0002042,6.58e-50,1;CL:0002039,6.58e-50,1;CL:0002040,6.58e-50,1;CL:0002041,6.58e-50,1;CL:0000893,9.18e-26,2;CL:0002489,9.18e-26,2;CL:0000809,9.18e-26,2;CL:0000808,9.18e-26,2;CL:0000894,9.18e-26,2;CL:0000806,9.18e-26,2;CL:0000807,9.18e-26,2;CL:0000805,9.18e-26,2;CL:0002425,9.18e-26,2 | |||
|ontology_enrichment_development_v019=CL:0002425;9.18e-26;2!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=CL:0002425;9.18e-26;2!UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0002370,1.29e-13,4;UBERON:0005058,1.29e-13,4;UBERON:0009113,1.29e-13,4;UBERON:0003295,1.29e-13,4;UBERON:0005562,1.29e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003351,1.57e-09,6;UBERON:0004177,2.35e-08,7;UBERON:0005057,2.35e-08,7 | |||
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|short_description=p@chr17:36656632..36656663,+ | |short_description=p@chr17:36656632..36656663,+ | ||
}} | }} |
Latest revision as of 15:56, 25 July 2015
Short description: | p@chr17:36656632..36656663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:36656632..36656663, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.58e-50 | 1 |
immature NK T cell | 6.58e-50 | 1 |
effector T cell | 6.58e-50 | 1 |
mature NK T cell | 6.58e-50 | 1 |
immature NK T cell stage IV | 6.58e-50 | 1 |
immature NK T cell stage I | 6.58e-50 | 1 |
immature NK T cell stage II | 6.58e-50 | 1 |
immature NK T cell stage III | 6.58e-50 | 1 |
thymocyte | 9.18e-26 | 2 |
double negative thymocyte | 9.18e-26 | 2 |
double-positive, alpha-beta thymocyte | 9.18e-26 | 2 |
DN4 thymocyte | 9.18e-26 | 2 |
DN1 thymic pro-T cell | 9.18e-26 | 2 |
DN2 thymocyte | 9.18e-26 | 2 |
DN3 thymocyte | 9.18e-26 | 2 |
immature single positive thymocyte | 9.18e-26 | 2 |
early T lineage precursor | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
thymus | 1.29e-13 | 4 |
hemolymphoid system gland | 1.29e-13 | 4 |
thymic region | 1.29e-13 | 4 |
pharyngeal gland | 1.29e-13 | 4 |
thymus primordium | 1.29e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
pharyngeal epithelium | 1.57e-09 | 6 |
hemopoietic organ | 2.35e-08 | 7 |
immune organ | 2.35e-08 | 7 |