FFCP PHASE1:Hg19::chr17:4872662..4872671,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:4872662..4872671,- | |||
|coexpression_cluster_id=C2421 | |||
|description=CAGE_peak_at_chr17:4872662..4872671,- | |description=CAGE_peak_at_chr17:4872662..4872671,- | ||
|id=chr17:4872662..4872671,- | |id=chr17:4872662..4872671,- | ||
|ontology_enrichment_celltype=CL:0000548!1.55e-16!679;CL:0000004!1.55e-16!679;CL:0000255!1.55e-16!679;CL:0000012!5.08e-16!682;CL:0000055!3.51e-15!180;CL:0002371!2.14e-12!591;CL:0000144!3.20e-12!625;CL:0000003!7.90e-11!722;CL:0000057!8.80e-10!75;CL:0000048!9.50e-08!430;CL:0000723!2.71e-07!436;CL:0000063!4.55e-07!578;CL:0000034!5.76e-07!444 | |ontology_enrichment_celltype=CL:0000548!1.55e-16!679;CL:0000004!1.55e-16!679;CL:0000255!1.55e-16!679;CL:0000012!5.08e-16!682;CL:0000055!3.51e-15!180;CL:0002371!2.14e-12!591;CL:0000144!3.20e-12!625;CL:0000003!7.90e-11!722;CL:0000057!8.80e-10!75;CL:0000048!9.50e-08!430;CL:0000723!2.71e-07!436;CL:0000063!4.55e-07!578;CL:0000034!5.76e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.40e-07;12!CL:0002580;3.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.11e-07,12;CL:0002580,3.39e-07,3;CL:0000048,4.82e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.17e-11;6!UBERON:0002358;1.17e-11;6!UBERON:0003684;1.17e-11;6!UBERON:0001178;1.17e-11;6!UBERON:0004457;7.58e-10;9!UBERON:0000042;7.58e-10;9!UBERON:0002331;6.23e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.96e-11,6;UBERON:0002358,2.96e-11,6;UBERON:0003684,2.96e-11,6;UBERON:0001178,2.96e-11,6;UBERON:0002331,6.32e-08,10;UBERON:0000358,6.32e-08,10;UBERON:0000307,6.32e-08,10;UBERON:0000091,6.32e-08,10;UBERON:0000087,6.32e-08,10;UBERON:0007010,6.32e-08,10;UBERON:0007806,6.32e-08,10;UBERON:0008780,6.32e-08,10;UBERON:0005728,6.32e-08,10;UBERON:0004457,6.21e-07,12;UBERON:0000042,6.21e-07,12 | |||
|phase1_expression=2.54349730978779,1.2846031433459,3.94672331468719,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0.261185628199839,0,5.58240934377942,0,0.263766978228454,0.866364470720326,0.662794751455832,0,0,0,0,0.123121058076788,0.612002073732759,1.25381888591235,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.697287110717054,2.46700732813095,1.54853185447552,0.575384784644301,1.2808035326455,1.41889337933151,0.344745680736619,0,2.70852973188684,0.188242339542605,0.272906150057846,0,0.612167784741805,0.962787081228281,0.639337125799041,0,0,0,0.870627715885752,1.70215567407342,0.622822248995575,0.502497330513487,1.0429658368404,0.217188844705117,0,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.722878304769133,1.00267582127178,3.33146993609895,0,2.43317435151318,0.283604451492204,0,0.175669571386252,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,0.25326102332916,1.05927344650575,4.30254931123221,0.709336764396714,0.560677600142307,0,2.22000793575444,0.311211035399766,1.0776853765575,0,0.151357427644931,0,4.92075006850973,0.312160076830321,0,0.149448680551801,0.704606991862589,0,0,0.408308342509787,0.122834317311768,0.516628905878827,0,1.97813543422845,1.82032272387605,5.74894513452991,0,0,0.277064115484183,1.31693286264251,0.919463387397059,1.35214253015937,0.226864366320042,0.538168907066586,0.85422955527427,0,0.300091096084402,0.103052529238439,1.28820270022815,0.37223371266318,0,0.779496041289589,1.51460264546469,0.552299391853796,0.484938170456436,1.42003837006646,0.604512589365842,0.169560592310488,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.828147600278907,1.01150814046861,0.241011029883482,0.772057809126758,0.217879444092406,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,1.96565443335525,0,0,0.245976877086227,0.343135620597051,0,0,0,0.370353780634118,1.95484983186195,0,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.268675568108545,0.581267877027924,0.383382679165211,0.985326475791887,0.088048434013226,0,0,0,0,0.763976851116555,0,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,1.16344544182,0,1.690605505112,0.797814349754612,0,0,0,0.532844358032199,1.57275793023962,1.08524321078289,0.823240336780769,0.325736184293735,0.710783897485092,0,0.602878754119172,0,0,0,0,0,1.67737398844108,1.14861935834114,0,0.289562613335158,0,0.537182889719687,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,2.98391526069709,1.03985430765404,0.892144943985809,1.26161932027148,0.937131319941706,0.902838299183157,2.27407504055985,6.2083842775503,1.99267679560631,0.737476674166813,0,0.391602314925481,0,0,0,0,0,0,0.907170879989041,3.96972492510043,2.30192959932094,3.64858122762996,3.84417447767103,1.02341449813341,2.0911009748669,1.48418066444991,0.154209693802656,0.710246901252508,0.246381468041427,0,0.464841513839837,0.120859449591622,0.200506470303285,1.47329582297434,1.26295892981067,0.364182336013434,0.131124414959424,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,7.80908147194327,0,0.183138929636687,0.082509499920588,0,0,0,2.61010939388729,0.308097234229289,0.15350367472613,0,0.429680979473094,0.290033387828457,0.170453254832202,1.69160867728801,0.165284915360978,0,0,0.6069466851333,3.71876439437829,6.92587163027408,1.3940745403212,1.54016790088044,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0.767693373934002,2.56763392820352,0,0.78494864019923,0.359744915166629,0,0.235624804691373,0.404364963146632,0,0,0,0,1.05650146756755,0.272999822815972,2.12108147930569,0,1.65409603063837,0.66343897524122,0,0,0.655894752046633,0.608731130888112,0.30982349809975,0.563391205064483,0.430234056612155,0.88424136911809,1.426684205925,1.06428319221179,0.422215270595328,1.64647446479951,0,4.19921664293979,0,0.670302275535787,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.284567373393656,0,0,0,2.11673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,4.45449878232388,0,0,0,0,0.935702702041099,0,0,0.222886768554957,0,0,0,0,0,0,0.890469640183247,0.659215496907038,0.211125408127993,0,0,0,0,0.246169610922139,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0.885741385813839,0,0,0,0,0,1.30726156222788,0,0.0769502585037971,0.683652335082007,0.69169171316418,0.359030577639089,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,3.55825354416746,1.97702302314405,1.46190729307638,0,0,0,0,0,0.971121518136371,0,0,0,0,2.55549813004637,0,0,0,0.313932918407225,0,0.284609546029793,1.10939738410511,0,0.293977192243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| ||
|short_description=p@chr17:4872662..4872671,- | |short_description=p@chr17:4872662..4872671,- | ||
}} | }} |
Latest revision as of 18:47, 25 July 2015
Short description: | p@chr17:4872662..4872671, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:4872662..4872671, - |
Coexpression cluster: | C2421_pineal_Fibroblast_cord_Keratocytes_mesenchymal_Smooth_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.11e-07 | 12 |
preadipocyte of the breast | 3.39e-07 | 3 |
multi fate stem cell | 4.82e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.96e-11 | 6 |
peritoneum | 2.96e-11 | 6 |
abdominal cavity | 2.96e-11 | 6 |
visceral peritoneum | 2.96e-11 | 6 |
umbilical cord | 6.32e-08 | 10 |
blastocyst | 6.32e-08 | 10 |
blastula | 6.32e-08 | 10 |
bilaminar disc | 6.32e-08 | 10 |
inner cell mass | 6.32e-08 | 10 |
cleaving embryo | 6.32e-08 | 10 |
connecting stalk | 6.32e-08 | 10 |
inner cell mass derived epiblast | 6.32e-08 | 10 |
extraembryonic mesoderm | 6.32e-08 | 10 |
cavity lining | 6.21e-07 | 12 |
serous membrane | 6.21e-07 | 12 |