FFCP PHASE1:Hg19::chr17:56708375..56708402,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:56708375..56708402,- | |||
|description=CAGE_peak_at_chr17:56708375..56708402,- | |description=CAGE_peak_at_chr17:56708375..56708402,- | ||
|id=chr17:56708375..56708402,- | |id=chr17:56708375..56708402,- | ||
|ontology_enrichment_celltype=CL:0000542!1.06e-11!53;CL:0000051!1.06e-11!53;CL:0000838!1.18e-10!52;CL:0002032!5.50e-10!165;CL:0000837!5.50e-10!165;CL:0000037!6.52e-10!172;CL:0000566!6.52e-10!172;CL:0000988!8.06e-09!182;CL:0000738!1.15e-07!140 | |ontology_enrichment_celltype=CL:0000542!1.06e-11!53;CL:0000051!1.06e-11!53;CL:0000838!1.18e-10!52;CL:0002032!5.50e-10!165;CL:0000837!5.50e-10!165;CL:0000037!6.52e-10!172;CL:0000566!6.52e-10!172;CL:0000988!8.06e-09!182;CL:0000738!1.15e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.78e-29;1!CL:0000911;1.78e-29;1!CL:0000814;1.78e-29;1!CL:0000771;1.78e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.20e-29,1;CL:0000914,4.20e-29,1;CL:0000911,4.20e-29,1;CL:0000814,4.20e-29,1;CL:0002042,4.20e-29,1;CL:0002039,4.20e-29,1;CL:0002040,4.20e-29,1;CL:0002041,4.20e-29,1;CL:0000771,1.54e-15,2;CL:0000893,2.74e-15,2;CL:0002489,2.74e-15,2;CL:0000809,2.74e-15,2;CL:0000808,2.74e-15,2;CL:0000894,2.74e-15,2;CL:0000806,2.74e-15,2;CL:0000807,2.74e-15,2;CL:0000805,2.74e-15,2;CL:0002425,2.74e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.78e-15;2 | |||
|ontology_enrichment_disease=DOID:162!3.09e-24!235;DOID:14566!2.30e-23!239;DOID:305!2.28e-15!106;DOID:0050687!3.63e-14!143;DOID:0050686!7.81e-12!137;DOID:2531!1.17e-11!51;DOID:0060083!1.17e-11!51;DOID:7!4.49e-08!39 | |ontology_enrichment_disease=DOID:162!3.09e-24!235;DOID:14566!2.30e-23!239;DOID:305!2.28e-15!106;DOID:0050687!3.63e-14!143;DOID:0050686!7.81e-12!137;DOID:2531!1.17e-11!51;DOID:0060083!1.17e-11!51;DOID:7!4.49e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:1036;3.79e-15;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.65e-15,8;DOID:1240,2.98e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.61e-08,4;UBERON:0005058,2.61e-08,4;UBERON:0009113,2.61e-08,4;UBERON:0003295,2.61e-08,4;UBERON:0005562,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0.293600439334847,0,0,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.918251677112708,0.641858054152187,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.432807638929335,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,1.70778359451767,0.317873157960757,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0.509991088181609,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,1.55975789423744,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.491545817507439,0.845248493434508,0,0,0.172214979660816,0,0,0,0,0,0,0.629063767423586,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,1.19370465096821,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0.293600439334847,0,0,1.08505435357926,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0.918251677112708,0.641858054152187,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.432807638929335,0.142283686696828,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,1.70778359451767,0.317873157960757,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0.509991088181609,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,1.55975789423744,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.643324774124777,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0.491545817507439,0.845248493434508,0,0,0.172214979660816,0,0,0,0,0,0,0.629063767423586,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.236387681767936,0.444925607568277,0,0,0.280272163313789,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,1.19370465096821,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr17:56708375..56708402,- | |short_description=p@chr17:56708375..56708402,- | ||
}} | }} |
Latest revision as of 19:21, 25 July 2015
Short description: | p@chr17:56708375..56708402, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56708375..56708402, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.20e-29 | 1 |
immature NK T cell | 4.20e-29 | 1 |
effector T cell | 4.20e-29 | 1 |
mature NK T cell | 4.20e-29 | 1 |
immature NK T cell stage IV | 4.20e-29 | 1 |
immature NK T cell stage I | 4.20e-29 | 1 |
immature NK T cell stage II | 4.20e-29 | 1 |
immature NK T cell stage III | 4.20e-29 | 1 |
eosinophil | 1.54e-15 | 2 |
thymocyte | 2.74e-15 | 2 |
double negative thymocyte | 2.74e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-15 | 2 |
DN4 thymocyte | 2.74e-15 | 2 |
DN1 thymic pro-T cell | 2.74e-15 | 2 |
DN2 thymocyte | 2.74e-15 | 2 |
DN3 thymocyte | 2.74e-15 | 2 |
immature single positive thymocyte | 2.74e-15 | 2 |
early T lineage precursor | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.61e-08 | 4 |
hemolymphoid system gland | 2.61e-08 | 4 |
thymic region | 2.61e-08 | 4 |
pharyngeal gland | 2.61e-08 | 4 |
thymus primordium | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.65e-15 | 8 |
leukemia | 2.98e-07 | 39 |