FFCP PHASE1:Hg19::chr17:56708375..56708402,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:56708375..56708402,-
|short_description=p@chr17:56708375..56708402,-
|description=CAGE_peak_at_chr17:56708375..56708402,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:56708375..56708402,- | |||
|description=CAGE_peak_at_chr17:56708375..56708402,- | |||
|id=chr17:56708375..56708402,- | |||
|ontology_enrichment_celltype=CL:0000542!1.06e-11!53;CL:0000051!1.06e-11!53;CL:0000838!1.18e-10!52;CL:0002032!5.50e-10!165;CL:0000837!5.50e-10!165;CL:0000037!6.52e-10!172;CL:0000566!6.52e-10!172;CL:0000988!8.06e-09!182;CL:0000738!1.15e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.78e-29;1!CL:0000911;1.78e-29;1!CL:0000814;1.78e-29;1!CL:0000771;1.78e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.20e-29,1;CL:0000914,4.20e-29,1;CL:0000911,4.20e-29,1;CL:0000814,4.20e-29,1;CL:0002042,4.20e-29,1;CL:0002039,4.20e-29,1;CL:0002040,4.20e-29,1;CL:0002041,4.20e-29,1;CL:0000771,1.54e-15,2;CL:0000893,2.74e-15,2;CL:0002489,2.74e-15,2;CL:0000809,2.74e-15,2;CL:0000808,2.74e-15,2;CL:0000894,2.74e-15,2;CL:0000806,2.74e-15,2;CL:0000807,2.74e-15,2;CL:0000805,2.74e-15,2;CL:0002425,2.74e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.78e-15;2 | |||
|ontology_enrichment_disease=DOID:162!3.09e-24!235;DOID:14566!2.30e-23!239;DOID:305!2.28e-15!106;DOID:0050687!3.63e-14!143;DOID:0050686!7.81e-12!137;DOID:2531!1.17e-11!51;DOID:0060083!1.17e-11!51;DOID:7!4.49e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.79e-15;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.65e-15,8;DOID:1240,2.98e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.61e-08,4;UBERON:0005058,2.61e-08,4;UBERON:0009113,2.61e-08,4;UBERON:0003295,2.61e-08,4;UBERON:0005562,2.61e-08,4 | |||
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| ||
|short_description=p@chr17:56708375..56708402,- | |||
}} | }} |
Latest revision as of 19:21, 25 July 2015
Short description: | p@chr17:56708375..56708402, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56708375..56708402, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.20e-29 | 1 |
immature NK T cell | 4.20e-29 | 1 |
effector T cell | 4.20e-29 | 1 |
mature NK T cell | 4.20e-29 | 1 |
immature NK T cell stage IV | 4.20e-29 | 1 |
immature NK T cell stage I | 4.20e-29 | 1 |
immature NK T cell stage II | 4.20e-29 | 1 |
immature NK T cell stage III | 4.20e-29 | 1 |
eosinophil | 1.54e-15 | 2 |
thymocyte | 2.74e-15 | 2 |
double negative thymocyte | 2.74e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-15 | 2 |
DN4 thymocyte | 2.74e-15 | 2 |
DN1 thymic pro-T cell | 2.74e-15 | 2 |
DN2 thymocyte | 2.74e-15 | 2 |
DN3 thymocyte | 2.74e-15 | 2 |
immature single positive thymocyte | 2.74e-15 | 2 |
early T lineage precursor | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.61e-08 | 4 |
hemolymphoid system gland | 2.61e-08 | 4 |
thymic region | 2.61e-08 | 4 |
pharyngeal gland | 2.61e-08 | 4 |
thymus primordium | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.65e-15 | 8 |
leukemia | 2.98e-07 | 39 |