FFCP PHASE1:Hg19::chr17:66164928..66164934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:66164928..66164934,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr17:66164928..66164934,- | |description=CAGE_peak_at_chr17:66164928..66164934,- | ||
|id=chr17:66164928..66164934,- | |id=chr17:66164928..66164934,- | ||
|ontology_enrichment_celltype=CL:0002150!1.76e-07!3;CL:0000861!1.76e-07!3 | |ontology_enrichment_celltype=CL:0002150!1.76e-07!3;CL:0000861!1.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002127;5.07e-13;1!CL:0000911;5.07e-13;1!CL:0000814;5.07e-13;1!CL:0000084;1.16e-11;25!CL:0000542;1.22e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.23e-13,1;CL:0000914,4.23e-13,1;CL:0000911,4.23e-13,1;CL:0000814,4.23e-13,1;CL:0002042,4.23e-13,1;CL:0002039,4.23e-13,1;CL:0002040,4.23e-13,1;CL:0002041,4.23e-13,1;CL:0000084,1.20e-11,25;CL:0000827,1.20e-11,25;CL:0000838,2.24e-10,52;CL:0000542,3.61e-10,53;CL:0000051,3.61e-10,53;CL:0000893,3.48e-07,2;CL:0002489,3.48e-07,2;CL:0000809,3.48e-07,2;CL:0000808,3.48e-07,2;CL:0000894,3.48e-07,2;CL:0000806,3.48e-07,2;CL:0000807,3.48e-07,2;CL:0000805,3.48e-07,2;CL:0002425,3.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.22e-07;53!CL:0002425;3.81e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.96e-13!10;DOID:2531!1.29e-10!51;DOID:0060083!1.29e-10!51;DOID:162!5.30e-10!235;DOID:14566!1.57e-09!239;DOID:1036!2.73e-09!8;DOID:0050686!1.09e-07!137;DOID:305!8.71e-07!106 | |ontology_enrichment_disease=DOID:0060058!4.96e-13!10;DOID:2531!1.29e-10!51;DOID:0060083!1.29e-10!51;DOID:162!5.30e-10!235;DOID:14566!1.57e-09!239;DOID:1036!2.73e-09!8;DOID:0050686!1.09e-07!137;DOID:305!8.71e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.27e-19;10!DOID:2531;6.28e-12;51!DOID:0060083;6.28e-12;51!DOID:1240;5.36e-08;39!DOID:1036;6.81e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.50e-19,10;DOID:2531,1.80e-17,51;DOID:0060083,1.80e-17,51;DOID:1240,1.78e-10,39;DOID:1036,7.01e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0003937!4.55e-07!12;UBERON:0005399!4.55e-07!12;UBERON:0003929!8.01e-07!54 | |ontology_enrichment_uberon=UBERON:0003937!4.55e-07!12;UBERON:0005399!4.55e-07!12;UBERON:0003929!8.01e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.28e-07;2!UBERON:0005058;2.28e-07;2!UBERON:0009113;2.28e-07;2!UBERON:0000473;9.52e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.84e-13,4;UBERON:0005058,6.84e-13,4;UBERON:0009113,6.84e-13,4;UBERON:0003295,6.84e-13,4;UBERON:0005562,6.84e-13,4;UBERON:0003351,6.77e-09,6;UBERON:0004177,9.56e-08,7;UBERON:0005057,9.56e-08,7;UBERON:0000473,8.85e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,2.01414721508784,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,2.14641561874808,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09024169590255,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28055318027145,4.14508309094938,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,0,0.332423363800313,0.225595660617181,0,0.671286347903371,0.189753732724185,3.49660473756833,0,0,0.848118428603645,0,0,0,0,3.55825354416746,0.247127877893006,0,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,34.2737396265043,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0.677294319023596,0.803982487948041,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.0671834724867263,0,2.32991899054908,0.472699093843342,0.412079291905832,0.606631894687664,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0,0,0,0.197611631897944,1.82688897571344,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.138314504928436,0.322951291263702,0,0.196295437002051,0.11796972334774,0,0,0,0,0.198916222116275,0,0.40341013740704,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0.556157009460346,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,1.81868875723775,3.7514978221865,0,0.103432995861895,0,0,0.0645889098360061,8.62838528712425,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr17:66164928..66164934,- | |short_description=p@chr17:66164928..66164934,- | ||
}} | }} |
Latest revision as of 20:10, 25 July 2015
Short description: | p@chr17:66164928..66164934, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:66164928..66164934, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.23e-13 | 1 |
immature NK T cell | 4.23e-13 | 1 |
effector T cell | 4.23e-13 | 1 |
mature NK T cell | 4.23e-13 | 1 |
immature NK T cell stage IV | 4.23e-13 | 1 |
immature NK T cell stage I | 4.23e-13 | 1 |
immature NK T cell stage II | 4.23e-13 | 1 |
immature NK T cell stage III | 4.23e-13 | 1 |
T cell | 1.20e-11 | 25 |
pro-T cell | 1.20e-11 | 25 |
lymphoid lineage restricted progenitor cell | 2.24e-10 | 52 |
lymphocyte | 3.61e-10 | 53 |
common lymphoid progenitor | 3.61e-10 | 53 |
thymocyte | 3.48e-07 | 2 |
double negative thymocyte | 3.48e-07 | 2 |
double-positive, alpha-beta thymocyte | 3.48e-07 | 2 |
DN4 thymocyte | 3.48e-07 | 2 |
DN1 thymic pro-T cell | 3.48e-07 | 2 |
DN2 thymocyte | 3.48e-07 | 2 |
DN3 thymocyte | 3.48e-07 | 2 |
immature single positive thymocyte | 3.48e-07 | 2 |
early T lineage precursor | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.84e-13 | 4 |
hemolymphoid system gland | 6.84e-13 | 4 |
thymic region | 6.84e-13 | 4 |
pharyngeal gland | 6.84e-13 | 4 |
thymus primordium | 6.84e-13 | 4 |
pharyngeal epithelium | 6.77e-09 | 6 |
hemopoietic organ | 9.56e-08 | 7 |
immune organ | 9.56e-08 | 7 |
testis | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.50e-19 | 10 |
hematologic cancer | 1.80e-17 | 51 |
immune system cancer | 1.80e-17 | 51 |
leukemia | 1.78e-10 | 39 |
chronic leukemia | 7.01e-07 | 8 |