FFCP PHASE1:Hg19::chr17:73750837..73750879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73750837..73750879,- | |||
|coexpression_cluster_id=C918 | |||
|description=CAGE_peak_at_chr17:73750837..73750879,- | |description=CAGE_peak_at_chr17:73750837..73750879,- | ||
|id=chr17:73750837..73750879,- | |id=chr17:73750837..73750879,- | ||
|ontology_enrichment_celltype=CL:0000066!1.06e-26!254;CL:0000223!1.16e-14!59;CL:0002076!1.80e-14!43;CL:0002251!1.31e-09!21;CL:0000622!7.29e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.06e-26!254;CL:0000223!1.16e-14!59;CL:0002076!1.80e-14!43;CL:0002251!1.31e-09!21;CL:0000622!7.29e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.04e-18;4!CL:0000731;1.04e-18;4!CL:0002076;2.58e-18;42!CL:0002251;3.37e-16;20!CL:0000622;1.71e-14;5!CL:0002623;8.34e-14;3!CL:0002577;1.61e-13;3!CL:0000154;4.28e-12;6!CL:0002327;3.43e-11;4!CL:0000575;6.14e-10;2!CL:0002368;3.35e-08;13!CL:0000150;4.38e-08;9!CL:0002159;4.59e-08;14!CL:0000240;9.34e-08;6!CL:0000311;9.34e-08;6!CL:0000079;9.34e-08;6!CL:0000237;9.34e-08;6!CL:0002231;3.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.78e-23,42;CL:0000066,3.13e-21,253;CL:0000223,3.15e-20,58;CL:0000244,8.69e-19,4;CL:0000731,8.69e-19,4;CL:0002251,4.69e-16,20;CL:0000622,1.37e-14,5;CL:0002623,6.42e-14,3;CL:0002577,1.68e-13,3;CL:0000154,3.55e-12,6;CL:0002327,3.38e-11,4;CL:0000575,8.99e-10,2;CL:0002368,2.91e-08,13;CL:0000150,3.88e-08,9;CL:0002159,5.18e-08,14;CL:0000240,9.25e-08,6;CL:0000311,9.25e-08,6;CL:0000079,9.25e-08,6;CL:0000237,9.25e-08,6;CL:0000036,9.25e-08,6;CL:0000357,9.25e-08,6;CL:0000114,9.25e-08,6;CL:0002231,3.84e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;7.43e-12;58!CL:0000357;9.34e-08;6!CL:0000114;9.34e-08;6 | |||
|ontology_enrichment_disease=DOID:305!3.98e-11!106;DOID:0050687!2.75e-08!143;DOID:1749!2.18e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.78e-19!169;UBERON:0000925!1.78e-19!169;UBERON:0006595!1.78e-19!169;UBERON:0001007!2.29e-12!155;UBERON:0001555!2.29e-12!155;UBERON:0007026!2.29e-12!155;UBERON:0000064!1.04e-09!219;UBERON:0000033!1.44e-09!123;UBERON:0004921!5.98e-09!129;UBERON:0004185!5.98e-09!129;UBERON:0000077!6.95e-09!130;UBERON:0000481!1.30e-08!347;UBERON:0000924!1.56e-08!173;UBERON:0006601!1.56e-08!173;UBERON:0000153!1.80e-08!129;UBERON:0007811!1.80e-08!129;UBERON:0001444!2.02e-08!48;UBERON:0004121!2.84e-08!169;UBERON:0000161!3.63e-08!35;UBERON:0000062!6.96e-08!511;UBERON:0001004!2.93e-07!72;UBERON:0005910!3.56e-07!6;UBERON:0000365!6.71e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!1.78e-19!169;UBERON:0000925!1.78e-19!169;UBERON:0006595!1.78e-19!169;UBERON:0001007!2.29e-12!155;UBERON:0001555!2.29e-12!155;UBERON:0007026!2.29e-12!155;UBERON:0000064!1.04e-09!219;UBERON:0000033!1.44e-09!123;UBERON:0004921!5.98e-09!129;UBERON:0004185!5.98e-09!129;UBERON:0000077!6.95e-09!130;UBERON:0000481!1.30e-08!347;UBERON:0000924!1.56e-08!173;UBERON:0006601!1.56e-08!173;UBERON:0000153!1.80e-08!129;UBERON:0007811!1.80e-08!129;UBERON:0001444!2.02e-08!48;UBERON:0004121!2.84e-08!169;UBERON:0000161!3.63e-08!35;UBERON:0000062!6.96e-08!511;UBERON:0001004!2.93e-07!72;UBERON:0005910!3.56e-07!6;UBERON:0000365!6.71e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.43e-15;5!UBERON:0000486;7.11e-13;12!UBERON:0005910;1.66e-12;6!UBERON:0001911;3.43e-11;4!UBERON:0001987;2.90e-10;4!UBERON:0000161;1.14e-07;19!UBERON:0000166;1.14e-07;19!UBERON:0001044;4.00e-07;6!UBERON:0003293;4.00e-07;6!UBERON:0003294;4.00e-07;6!UBERON:0010047;4.00e-07;6!UBERON:0003408;4.00e-07;6!UBERON:0000167;4.00e-07;6!UBERON:0000165;8.54e-07;28!UBERON:0000033;9.77e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.72e-15,5;UBERON:0005910,1.47e-12,6;UBERON:0004119,3.38e-11,160;UBERON:0000925,3.38e-11,160;UBERON:0006595,3.38e-11,160;UBERON:0001911,3.38e-11,4;UBERON:0005333,3.38e-11,4;UBERON:0008425,3.38e-11,4;UBERON:0005311,3.38e-11,4;UBERON:0001987,3.00e-10,4;UBERON:0004340,3.00e-10,4;UBERON:0003124,7.41e-10,7;UBERON:0001444,1.47e-08,49;UBERON:0005085,4.76e-08,31;UBERON:0005631,2.52e-07,14;UBERON:0000158,2.52e-07,14;UBERON:0000033,3.13e-07,56;UBERON:0001044,3.52e-07,6;UBERON:0003293,3.52e-07,6;UBERON:0003294,3.52e-07,6;UBERON:0010047,3.52e-07,6;UBERON:0000167,3.52e-07,6;UBERON:0003102,7.89e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.31883489114227,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.130979075497713,7.28590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.15956511897978,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,1.88724591328378,18.9867993756922,0,9.4497234066933,10.9254365287065,0,0,0,0.695582429850461,0,0,0,0,2.37061319387782,0,0,0,0,0,0.671928512795438,0.708875486211932,13.7024539735358,10.7534557250166,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.473107245101804,0.234282829985426,0,0,0,0,0,0,0.979005787313703,0,0,0,0,1.21251028578504,1.66435439510497,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,6.81721999031168,4.05156351317944,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,1.64007322849853,0.325378394664303,0.103041011647722,0,0,0.574265537996172,4.55042172225565,0,0.096670718292122,0,0,0,0,0,0,0,1.98341898433174,4.61256161676255,1.53135254993501,3.54052232994425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,7.74909670808214,1.68471475667626,4.43430153536676,17.229255015522,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.463840490809256,0,0,0,0,6.94140034541548,0,0.709163045303809,0,0,0,0,0.361789315876224,0,0.552896299656123,0,0,0,1.81250867562184,0.0769502585037971,0,0.23056390438806,0.897576444097721,0.651884231532048,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0.104421949505455,0.539209063845416,0,0,0,0.19566461893209,1.21390189767046,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.609414446062818,0,0,0.290268993867255,0.292357268344742,0.328461828212837,0.290967049465258,0,0,0.137041924646751,0,0.0633107959558787,0.391102765469606,0,0.426905989478705,0,0.432271251462318,0,0,0.576219191952599,0.124252535565433,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.393915911536118,0.329663433524666,0.404421263125109,0,0,0,0.544813624446302,0,0,0,0,0,0,2.68347750079413,0,0.0524545881349981,0.105600336519406,0,0.767660789277781,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0.221858103073705,0.372578417648301,0,0.624902039810533,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,1.79088841081487,0.926404341482917,0.438568099157414,0,0.192914038270915,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.484426936895553,0,0.490738592505128,0.589848616738702,0.733714394086716,2.07946199070609,0,0,0,0.0752103283492573,0,0.781514011233092,0.785720083444267,0.163771917510097,0.887136517302272,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,1.27762427639595,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0.236387681767936,0.667388411352415,0.156986185701028,0.314231179832004,0.280272163313789,0,0,0,0.285906176706625,0,0,0,0,2.90102629828252,2.7314956335032,1.38251932362818,0,0,0,0.423387050190929,0.9164274741762,0,0,0.559277158988962,0.196300467230486,2.07260472469858,0,0,0,0,0,0,0,0,0,0,1.389134845943,0.655678681511872,0,0.490296643507811,0,0.392616934229891,0.891139200981258,0,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0.286679166302903,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0.202117188958219,0.2177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| ||
|short_description=p@chr17:73750837..73750879,- | |short_description=p@chr17:73750837..73750879,- | ||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73750837..73750879, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73750837..73750879, - |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.78e-23 | 42 |
epithelial cell | 3.13e-21 | 253 |
endodermal cell | 3.15e-20 | 58 |
transitional epithelial cell | 8.69e-19 | 4 |
urothelial cell | 8.69e-19 | 4 |
epithelial cell of alimentary canal | 4.69e-16 | 20 |
acinar cell | 1.37e-14 | 5 |
acinar cell of salivary gland | 6.42e-14 | 3 |
placental epithelial cell | 1.68e-13 | 3 |
protein secreting cell | 3.55e-12 | 6 |
mammary gland epithelial cell | 3.38e-11 | 4 |
corneal epithelial cell | 8.99e-10 | 2 |
respiratory epithelial cell | 2.91e-08 | 13 |
glandular epithelial cell | 3.88e-08 | 9 |
general ecto-epithelial cell | 5.18e-08 | 14 |
stratified squamous epithelial cell | 9.25e-08 | 6 |
keratin accumulating cell | 9.25e-08 | 6 |
stratified epithelial cell | 9.25e-08 | 6 |
keratinizing barrier epithelial cell | 9.25e-08 | 6 |
epithelial fate stem cell | 9.25e-08 | 6 |
stratified epithelial stem cell | 9.25e-08 | 6 |
surface ectodermal cell | 9.25e-08 | 6 |
epithelial cell of prostate | 3.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.72e-15 | 5 |
transitional epithelium | 1.47e-12 | 6 |
endoderm-derived structure | 3.38e-11 | 160 |
endoderm | 3.38e-11 | 160 |
presumptive endoderm | 3.38e-11 | 160 |
mammary gland | 3.38e-11 | 4 |
mammary bud | 3.38e-11 | 4 |
mammary ridge | 3.38e-11 | 4 |
mammary placode | 3.38e-11 | 4 |
placenta | 3.00e-10 | 4 |
allantois | 3.00e-10 | 4 |
chorion | 7.41e-10 | 7 |
subdivision of head | 1.47e-08 | 49 |
ectodermal placode | 4.76e-08 | 31 |
extraembryonic membrane | 2.52e-07 | 14 |
membranous layer | 2.52e-07 | 14 |
head | 3.13e-07 | 56 |
saliva-secreting gland | 3.52e-07 | 6 |
gland of oral region | 3.52e-07 | 6 |
gland of foregut | 3.52e-07 | 6 |
oral gland | 3.52e-07 | 6 |
oral cavity | 3.52e-07 | 6 |
surface structure | 7.89e-07 | 99 |