FFCP PHASE1:Hg19::chr17:8620771..8620777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8620771..8620777,- | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr17:8620771..8620777,- | |description=CAGE_peak_at_chr17:8620771..8620777,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.39e-17;7!CL:0000586;4.39e-17;7!CL:0002127;8.57e-14;1!CL:0000911;8.57e-14;1!CL:0000814;8.57e-14;1!CL:0002097;1.99e-07;2 | |ontology_enrichment_celltype_v019=CL:0000039;4.39e-17;7!CL:0000586;4.39e-17;7!CL:0002127;8.57e-14;1!CL:0000911;8.57e-14;1!CL:0000814;8.57e-14;1!CL:0002097;1.99e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.39e-17,7;CL:0000586,4.39e-17,7;CL:0002127,8.58e-14,1;CL:0000914,8.58e-14,1;CL:0000911,8.58e-14,1;CL:0000814,8.58e-14,1;CL:0002042,8.58e-14,1;CL:0002039,8.58e-14,1;CL:0002040,8.58e-14,1;CL:0002041,8.58e-14,1;CL:0000893,1.54e-07,2;CL:0002489,1.54e-07,2;CL:0000809,1.54e-07,2;CL:0000808,1.54e-07,2;CL:0000894,1.54e-07,2;CL:0000806,1.54e-07,2;CL:0000807,1.54e-07,2;CL:0000805,1.54e-07,2;CL:0002425,1.54e-07,2;CL:0002097,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.54e-07;2 | |ontology_enrichment_development_v019=CL:0002425;1.54e-07;2 | ||
|ontology_enrichment_disease=DOID:162!1.37e-14!235;DOID:14566!5.15e-14!239;DOID:0050687!5.84e-09!143;DOID:1749!3.41e-08!14;DOID:305!1.24e-07!106 | |ontology_enrichment_disease=DOID:162!1.37e-14!235;DOID:14566!5.15e-14!239;DOID:0050687!5.84e-09!143;DOID:1749!3.41e-08!14;DOID:305!1.24e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:6193;6.65e-14;1!DOID:1799;1.42e-13;1!DOID:10165;1.42e-13;1!DOID:1798;1.42e-13;1!DOID:170;4.20e-09;6!DOID:3350;1.36e-07;2 | |ontology_enrichment_disease_v019=DOID:6193;6.65e-14;1!DOID:1799;1.42e-13;1!DOID:10165;1.42e-13;1!DOID:1798;1.42e-13;1!DOID:170;4.20e-09;6!DOID:3350;1.36e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,7.55e-14,1;DOID:1799,1.25e-13,1;DOID:10165,1.25e-13,1;DOID:1798,1.25e-13,1;DOID:170,4.37e-09,6;DOID:3350,1.45e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.34e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.34e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.24e-07,8 | |||
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| ||
|short_description=p@chr17:8620771..8620777,- | |short_description=p@chr17:8620771..8620777,- | ||
}} | }} |
Latest revision as of 23:23, 25 July 2015
Short description: | p@chr17:8620771..8620777, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8620771..8620777, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.39e-17 | 7 |
germ cell | 4.39e-17 | 7 |
innate effector T cell | 8.58e-14 | 1 |
immature NK T cell | 8.58e-14 | 1 |
effector T cell | 8.58e-14 | 1 |
mature NK T cell | 8.58e-14 | 1 |
immature NK T cell stage IV | 8.58e-14 | 1 |
immature NK T cell stage I | 8.58e-14 | 1 |
immature NK T cell stage II | 8.58e-14 | 1 |
immature NK T cell stage III | 8.58e-14 | 1 |
thymocyte | 1.54e-07 | 2 |
double negative thymocyte | 1.54e-07 | 2 |
double-positive, alpha-beta thymocyte | 1.54e-07 | 2 |
DN4 thymocyte | 1.54e-07 | 2 |
DN1 thymic pro-T cell | 1.54e-07 | 2 |
DN2 thymocyte | 1.54e-07 | 2 |
DN3 thymocyte | 1.54e-07 | 2 |
immature single positive thymocyte | 1.54e-07 | 2 |
early T lineage precursor | 1.54e-07 | 2 |
cortical cell of adrenal gland | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.55e-14 | 1 |
islet cell tumor | 1.25e-13 | 1 |
endocrine pancreas cancer | 1.25e-13 | 1 |
pancreatic endocrine carcinoma | 1.25e-13 | 1 |
endocrine gland cancer | 4.37e-09 | 6 |
mesenchymal cell neoplasm | 1.45e-07 | 2 |