FFCP PHASE1:Hg19::chr18:19749933..19749951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:19749933..19749951,+ | |||
|coexpression_cluster_id=C124 | |coexpression_cluster_id=C124 | ||
|description=CAGE_peak_at_chr18:19749933..19749951,+ | |description=CAGE_peak_at_chr18:19749933..19749951,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000306!4.50e-11!4;CL:0002547!4.50e-11!4;CL:0002579!6.01e-09!3;CL:0000077!5.61e-08!19 | |ontology_enrichment_celltype=CL:1000306!4.50e-11!4;CL:0002547!4.50e-11!4;CL:0002579!6.01e-09!3;CL:0000077!5.61e-08!19 | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.50e-14;1!CL:0000039;1.71e-08;7!CL:0000586;1.71e-08;7 | |ontology_enrichment_celltype_v019=CL:0002591;1.50e-14;1!CL:0000039;1.71e-08;7!CL:0000586;1.71e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.75e-14,1;CL:0000039,1.42e-08,7;CL:0000586,1.42e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.50e-14;1 | |ontology_enrichment_development_v019=UBERON:0004140;1.50e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.50e-14!27;UBERON:0000948!1.66e-13!24;UBERON:0005498!1.66e-13!24;UBERON:0004140!1.66e-13!24;UBERON:0009881!1.66e-13!24;UBERON:0004141!1.66e-13!24;UBERON:0003084!1.66e-13!24;UBERON:0007005!1.66e-13!24;UBERON:0004139!1.66e-13!24;UBERON:0004291!1.66e-13!24;UBERON:0000415!4.50e-11!4;UBERON:0007240!4.50e-11!4;UBERON:0005742!4.50e-11!4;UBERON:0005734!4.50e-11!4;UBERON:0004664!4.50e-11!4;UBERON:0004663!4.50e-11!4;UBERON:0000060!2.32e-07!12;UBERON:0003914!7.42e-07!118 | |ontology_enrichment_uberon=UBERON:0007100!9.50e-14!27;UBERON:0000948!1.66e-13!24;UBERON:0005498!1.66e-13!24;UBERON:0004140!1.66e-13!24;UBERON:0009881!1.66e-13!24;UBERON:0004141!1.66e-13!24;UBERON:0003084!1.66e-13!24;UBERON:0007005!1.66e-13!24;UBERON:0004139!1.66e-13!24;UBERON:0004291!1.66e-13!24;UBERON:0000415!4.50e-11!4;UBERON:0007240!4.50e-11!4;UBERON:0005742!4.50e-11!4;UBERON:0005734!4.50e-11!4;UBERON:0004664!4.50e-11!4;UBERON:0004663!4.50e-11!4;UBERON:0000060!2.32e-07!12;UBERON:0003914!7.42e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.18e-25;4!UBERON:0000160;2.67e-12;17!UBERON:0005409;1.11e-09;22!UBERON:0000078;6.35e-08;2!UBERON:0002012;6.35e-08;2!UBERON:0008886;6.35e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002108;4.18e-25;4!UBERON:0000160;2.67e-12;17!UBERON:0005409;1.11e-09;22!UBERON:0000078;6.35e-08;2!UBERON:0002012;6.35e-08;2!UBERON:0008886;6.35e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.19e-25,4;UBERON:0000160,2.63e-12,17;UBERON:0005409,1.37e-08,25;UBERON:0000078,8.60e-08,2;UBERON:0007497,8.60e-08,2;UBERON:0003643,8.60e-08,2;UBERON:0003504,8.60e-08,2;UBERON:0003469,8.60e-08,2;UBERON:0003496,8.60e-08,2;UBERON:0002012,8.60e-08,2;UBERON:0008886,8.60e-08,2;UBERON:0007303,8.60e-08,2;UBERON:0002061,8.60e-08,2;UBERON:0005432,8.60e-08,2;UBERON:0004363,8.60e-08,2 | |||
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| ||
|short_description=p@chr18:19749933..19749951,+ | |short_description=p@chr18:19749933..19749951,+ | ||
}} | }} |
Latest revision as of 23:53, 25 July 2015
Short description: | p@chr18:19749933..19749951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19749933..19749951, + |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.75e-14 | 1 |
germ line cell | 1.42e-08 | 7 |
germ cell | 1.42e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
small intestine | 4.19e-25 | 4 |
intestine | 2.63e-12 | 17 |
gastrointestinal system | 1.37e-08 | 25 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.60e-08 | 2 |
developing epithelial placode | 8.60e-08 | 2 |
respiratory system arterial blood vessel | 8.60e-08 | 2 |
respiratory system blood vessel | 8.60e-08 | 2 |
respiratory system artery | 8.60e-08 | 2 |
head blood vessel | 8.60e-08 | 2 |
pulmonary artery | 8.60e-08 | 2 |
pulmonary vascular system | 8.60e-08 | 2 |
pharyngeal vasculature | 8.60e-08 | 2 |
truncus arteriosus | 8.60e-08 | 2 |
aortic sac | 8.60e-08 | 2 |
pharyngeal arch artery | 8.60e-08 | 2 |