FFCP PHASE1:Hg19::chr18:3604203..3604215,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3604203..3604215,+
|short_description=p6@ENST00000445581,p6@uc002kmi.2
|description=CAGE_peak_6_at_ENST00000445581_5end,CAGE_peak_6_at_uc002kmi.2_5end
|as...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=467bp_to_ENST00000445581,uc002kmi.2_5end | |||
|cluster_id=chr18:3604203..3604215,+ | |||
|coexpression_cluster_id=C998 | |||
|description=CAGE_peak_6_at_ENST00000445581_5end,CAGE_peak_6_at_uc002kmi.2_5end | |||
|id=chr18:3604203..3604215,+ | |||
|ontology_enrichment_celltype=CL:0000047!8.16e-08!8;CL:0000055!2.84e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000048;3.56e-14;58!CL:0000723;4.28e-14;61!CL:0000569;6.97e-13;4!CL:0000134;6.39e-12;55!CL:0000034;5.19e-10;69!CL:0002195;3.43e-07;2!CL:0002561;3.43e-07;2!CL:0002571;3.43e-07;2!CL:0000047;4.72e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,7.79e-13,4;CL:0000011,7.79e-13,4;CL:0000047,3.06e-09,8;CL:0002561,3.66e-07,2;CL:0002195,4.01e-07,2;CL:0002571,4.01e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;6.97e-13;4 | |||
|ontology_enrichment_disease=DOID:2394!2.41e-11!14;DOID:120!1.44e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-24;14!DOID:120;1.02e-13;27!DOID:193;1.41e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.16e-25,14;DOID:120,8.46e-14,27;DOID:193,1.18e-12,29 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.36e-11;13!UBERON:0002118;1.03e-10;5!UBERON:0002119;3.37e-07;4!UBERON:0005933;3.43e-07;2!UBERON:0005942;3.43e-07;2!UBERON:0005932;3.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,6.39e-11,13;UBERON:0002118,1.24e-10,5;UBERON:0002119,2.33e-07,4;UBERON:0005933,3.66e-07,2;UBERON:0005942,3.66e-07,2;UBERON:0005932,3.66e-07,2 | |||
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| ||
|short_description=p6@ENST00000445581,p6@uc002kmi.2 | |||
}} | }} |
Latest revision as of 00:47, 26 July 2015
Short description: | p6@ENST00000445581, p6@uc002kmi.2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000445581_5end, CAGE_peak_6_at_uc002kmi.2_5end |
Coexpression cluster: | C998_Fibroblast_Smooth_mesenchymal_Hair_normal_Preadipocyte_Mesenchymal |
Association with transcript: | 467bp_to_ENST00000445581, uc002kmi.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 7.79e-13 | 4 |
migratory trunk neural crest cell | 7.79e-13 | 4 |
neuronal stem cell | 3.06e-09 | 8 |
outer root sheath cell | 3.66e-07 | 2 |
hepatic stem cell | 4.01e-07 | 2 |
hepatic mesenchymal stem cell | 4.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
female gonad | 6.39e-11 | 13 |
right ovary | 1.24e-10 | 5 |
left ovary | 2.33e-07 | 4 |
hair root sheath | 3.66e-07 | 2 |
hair outer root sheath | 3.66e-07 | 2 |
bulb of hair follicle | 3.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.16e-25 | 14 |
female reproductive organ cancer | 8.46e-14 | 27 |
reproductive organ cancer | 1.18e-12 | 29 |