FFCP PHASE1:Hg19::chr19:16435987..16435993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:16435987..16435993,+ | |||
|coexpression_cluster_id=C1032 | |coexpression_cluster_id=C1032 | ||
|description=CAGE_peak_at_chr19:16435987..16435993,+ | |description=CAGE_peak_at_chr19:16435987..16435993,+ | ||
|id=chr19:16435987..16435993,+ | |id=chr19:16435987..16435993,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.09e-18!18;CL:0000789!2.09e-18!18;CL:0002420!2.09e-18!18;CL:0002419!2.09e-18!18;CL:0000790!2.09e-18!18;CL:0000738!2.85e-18!140;CL:0002087!1.82e-16!119;CL:0002031!1.68e-15!124;CL:0000838!5.37e-14!52;CL:0000084!6.25e-14!25;CL:0000827!6.25e-14!25;CL:0000542!1.32e-13!53;CL:0000051!1.32e-13!53;CL:0000037!3.27e-13!172;CL:0000566!3.27e-13!172;CL:0002393!1.63e-12!9;CL:0002397!1.63e-12!9;CL:0000624!2.11e-12!6;CL:0002032!8.52e-12!165;CL:0000837!8.52e-12!165;CL:0000988!8.98e-12!182;CL:0000625!8.02e-10!11;CL:0000623!1.60e-07!3;CL:0000825!1.60e-07!3;CL:0000875!6.74e-07!3;CL:0002396!6.74e-07!3;CL:0000898!9.01e-07!3 | |ontology_enrichment_celltype=CL:0000791!2.09e-18!18;CL:0000789!2.09e-18!18;CL:0002420!2.09e-18!18;CL:0002419!2.09e-18!18;CL:0000790!2.09e-18!18;CL:0000738!2.85e-18!140;CL:0002087!1.82e-16!119;CL:0002031!1.68e-15!124;CL:0000838!5.37e-14!52;CL:0000084!6.25e-14!25;CL:0000827!6.25e-14!25;CL:0000542!1.32e-13!53;CL:0000051!1.32e-13!53;CL:0000037!3.27e-13!172;CL:0000566!3.27e-13!172;CL:0002393!1.63e-12!9;CL:0002397!1.63e-12!9;CL:0000624!2.11e-12!6;CL:0002032!8.52e-12!165;CL:0000837!8.52e-12!165;CL:0000988!8.98e-12!182;CL:0000625!8.02e-10!11;CL:0000623!1.60e-07!3;CL:0000825!1.60e-07!3;CL:0000875!6.74e-07!3;CL:0002396!6.74e-07!3;CL:0000898!9.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.08e-27;3!CL:0000624;5.25e-23;6!CL:0000791;1.04e-22;18!CL:0000789;1.04e-22;18!CL:0002419;1.04e-22;18!CL:0000097;3.18e-16;5!CL:0000084;3.67e-16;25!CL:0000542;3.29e-12;53!CL:0000163;2.95e-09;9!CL:0000625;1.05e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.75e-27,3;CL:0000825,1.75e-27,3;CL:0000624,3.73e-23,6;CL:0000791,7.88e-23,18;CL:0000789,7.88e-23,18;CL:0002420,7.88e-23,18;CL:0002419,7.88e-23,18;CL:0000790,7.88e-23,18;CL:0000838,3.90e-22,52;CL:0000542,1.11e-21,53;CL:0000051,1.11e-21,53;CL:0000097,2.73e-16,5;CL:0002028,2.73e-16,5;CL:0000084,3.01e-16,25;CL:0000827,3.01e-16,25;CL:0002031,1.03e-15,120;CL:0000738,1.75e-15,136;CL:0002087,2.65e-12,115;CL:0000037,5.33e-12,168;CL:0000988,3.03e-11,177;CL:0002032,4.86e-11,161;CL:0000837,4.86e-11,161;CL:0000163,2.71e-09,9;CL:0000625,9.91e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.04e-22;18!CL:0000051;3.29e-12;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr19:16435987..16435993,+ | |short_description=p@chr19:16435987..16435993,+ | ||
}} | }} |
Latest revision as of 04:42, 26 July 2015
Short description: | p@chr19:16435987..16435993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:16435987..16435993, + |
Coexpression cluster: | C1032_Mast_Natural_CD4_CD8_CD19_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.75e-27 | 3 |
pro-NK cell | 1.75e-27 | 3 |
CD4-positive, alpha-beta T cell | 3.73e-23 | 6 |
mature alpha-beta T cell | 7.88e-23 | 18 |
alpha-beta T cell | 7.88e-23 | 18 |
immature T cell | 7.88e-23 | 18 |
mature T cell | 7.88e-23 | 18 |
immature alpha-beta T cell | 7.88e-23 | 18 |
lymphoid lineage restricted progenitor cell | 3.90e-22 | 52 |
lymphocyte | 1.11e-21 | 53 |
common lymphoid progenitor | 1.11e-21 | 53 |
mast cell | 2.73e-16 | 5 |
basophil mast progenitor cell | 2.73e-16 | 5 |
T cell | 3.01e-16 | 25 |
pro-T cell | 3.01e-16 | 25 |
hematopoietic lineage restricted progenitor cell | 1.03e-15 | 120 |
leukocyte | 1.75e-15 | 136 |
nongranular leukocyte | 2.65e-12 | 115 |
hematopoietic stem cell | 5.33e-12 | 168 |
hematopoietic cell | 3.03e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.86e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.86e-11 | 161 |
endocrine cell | 2.71e-09 | 9 |
CD8-positive, alpha-beta T cell | 9.91e-08 | 11 |