FFCP PHASE1:Hg19::chr19:17295496..17295508,+: Difference between revisions
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|id=chr19:17295496..17295508,+
|short_description=p@chr19:17295496..17295508,+
|description=CAGE_peak_at_chr19:17295496..17295508,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:17295496..17295508,+ | |||
|coexpression_cluster_id=C300 | |||
|description=CAGE_peak_at_chr19:17295496..17295508,+ | |||
|id=chr19:17295496..17295508,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.85e-23!18;CL:0000789!4.85e-23!18;CL:0002420!4.85e-23!18;CL:0002419!4.85e-23!18;CL:0000790!4.85e-23!18;CL:0000084!6.25e-18!25;CL:0000827!6.25e-18!25;CL:0000625!1.27e-17!11;CL:0000838!1.43e-15!52;CL:0000542!3.76e-15!53;CL:0000051!3.76e-15!53;CL:0000037!1.99e-14!172;CL:0000566!1.99e-14!172;CL:0002087!4.02e-13!119;CL:0000988!6.02e-13!182;CL:0002032!6.73e-13!165;CL:0000837!6.73e-13!165;CL:0000738!2.37e-11!140;CL:0002031!1.29e-09!124;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0000842!7.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.17e-12;11!CL:0000791;1.22e-10;18!CL:0000789;1.22e-10;18!CL:0002419;1.22e-10;18!CL:0000084;3.58e-10;25!CL:0000623;2.59e-08;3!CL:0002127;3.07e-07;1!CL:0000911;3.07e-07;1!CL:0000814;3.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.86e-12,11;CL:0000838,7.32e-11,52;CL:0000542,1.28e-10,53;CL:0000051,1.28e-10,53;CL:0000791,1.53e-10,18;CL:0000789,1.53e-10,18;CL:0002420,1.53e-10,18;CL:0002419,1.53e-10,18;CL:0000790,1.53e-10,18;CL:0000084,4.34e-10,25;CL:0000827,4.34e-10,25;CL:0000623,2.33e-08,3;CL:0000825,2.33e-08,3;CL:0002032,2.41e-07,161;CL:0000837,2.41e-07,161;CL:0002127,3.36e-07,1;CL:0000914,3.36e-07,1;CL:0000911,3.36e-07,1;CL:0000814,3.36e-07,1;CL:0002042,3.36e-07,1;CL:0002039,3.36e-07,1;CL:0002040,3.36e-07,1;CL:0002041,3.36e-07,1;CL:0000037,6.85e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-10;18!UBERON:0001045;7.55e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.95e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.39e-10!15;UBERON:0000179!9.39e-10!15;UBERON:0000463!9.39e-10!15;UBERON:0004177!1.33e-09!7;UBERON:0002370!2.54e-08!4;UBERON:0005058!2.54e-08!4;UBERON:0009113!2.54e-08!4;UBERON:0003295!2.54e-08!4;UBERON:0005562!2.54e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;7.55e-07;1!UBERON:0001154;7.55e-07;1!UBERON:0001153;7.55e-07;1!UBERON:0002171;7.55e-07;1!UBERON:0009854;7.55e-07;1!UBERON:0001961;7.55e-07;1!UBERON:0001744;7.55e-07;1!UBERON:0006518;7.55e-07;1!UBERON:0008949;7.55e-07;1!UBERON:0000101;7.55e-07;1!UBERON:0001042;7.55e-07;1!UBERON:0002167;7.55e-07;1!UBERON:0001735;7.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.37e-07,1;UBERON:0001153,5.37e-07,1;UBERON:0001045,5.37e-07,1;UBERON:0002171,9.51e-07,1;UBERON:0006518,9.51e-07,1;UBERON:0008949,9.51e-07,1;UBERON:0000101,9.51e-07,1;UBERON:0002167,9.51e-07,1 | |||
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| ||
|short_description=p@chr19:17295496..17295508,+ | |||
}} | }} |
Latest revision as of 04:48, 26 July 2015
Short description: | p@chr19:17295496..17295508, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:17295496..17295508, + |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.86e-12 | 11 |
lymphoid lineage restricted progenitor cell | 7.32e-11 | 52 |
lymphocyte | 1.28e-10 | 53 |
common lymphoid progenitor | 1.28e-10 | 53 |
mature alpha-beta T cell | 1.53e-10 | 18 |
alpha-beta T cell | 1.53e-10 | 18 |
immature T cell | 1.53e-10 | 18 |
mature T cell | 1.53e-10 | 18 |
immature alpha-beta T cell | 1.53e-10 | 18 |
T cell | 4.34e-10 | 25 |
pro-T cell | 4.34e-10 | 25 |
natural killer cell | 2.33e-08 | 3 |
pro-NK cell | 2.33e-08 | 3 |
hematopoietic oligopotent progenitor cell | 2.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-07 | 161 |
innate effector T cell | 3.36e-07 | 1 |
immature NK T cell | 3.36e-07 | 1 |
effector T cell | 3.36e-07 | 1 |
mature NK T cell | 3.36e-07 | 1 |
immature NK T cell stage IV | 3.36e-07 | 1 |
immature NK T cell stage I | 3.36e-07 | 1 |
immature NK T cell stage II | 3.36e-07 | 1 |
immature NK T cell stage III | 3.36e-07 | 1 |
hematopoietic stem cell | 6.85e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.37e-07 | 1 |
caecum | 5.37e-07 | 1 |
midgut | 5.37e-07 | 1 |
lower lobe of right lung | 9.51e-07 | 1 |
right lung lobe | 9.51e-07 | 1 |
lower lobe of lung | 9.51e-07 | 1 |
lobe of lung | 9.51e-07 | 1 |
right lung | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.95e-08 | 39 |