FFCP PHASE1:Hg19::chr19:20615031..20615039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20615031..20615039,- | |||
|coexpression_cluster_id=C3769 | |||
|description=CAGE_peak_at_chr19:20615031..20615039,- | |description=CAGE_peak_at_chr19:20615031..20615039,- | ||
|id=chr19:20615031..20615039,- | |id=chr19:20615031..20615039,- | ||
|ontology_enrichment_celltype=CL:0000945!1.72e-12!24;CL:0000826!1.72e-12!24;CL:0000313!2.37e-10!1;CL:0000946!7.55e-10!1;CL:0000786!7.55e-10!1;CL:0000980!7.55e-10!1 | |ontology_enrichment_celltype=CL:0000945!1.72e-12!24;CL:0000826!1.72e-12!24;CL:0000313!2.37e-10!1;CL:0000946!7.55e-10!1;CL:0000786!7.55e-10!1;CL:0000980!7.55e-10!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.34e-66;1!UBERON:0007297;5.96e-34;2!UBERON:0003918;2.22e-27;10!UBERON:0007687;2.22e-27;10!UBERON:0003104;6.09e-10;31 | |||
|ontology_enrichment_disease=DOID:2152!2.37e-10!1 | |ontology_enrichment_disease=DOID:2152!2.37e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:4468;5.96e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.04e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.46e-27!3;UBERON:0004054!1.46e-27!3;UBERON:0005904!7.74e-21!4;UBERON:0004175!2.86e-12!25;UBERON:0000998!1.98e-10!1;UBERON:0006868!1.98e-10!1;UBERON:0001000!2.16e-10!1;UBERON:0005352!2.16e-10!1;UBERON:0004911!2.37e-10!1;UBERON:0001301!2.84e-10!1;UBERON:0001874!5.30e-10!1;UBERON:0003133!2.81e-08!48;UBERON:0002113!3.80e-08!27;UBERON:0003918!3.80e-08!27;UBERON:0005095!3.80e-08!27;UBERON:0007687!3.80e-08!27;UBERON:0003135!6.52e-08!11;UBERON:0005172!4.55e-07!55;UBERON:0005173!4.55e-07!55;UBERON:0000489!7.69e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;3.34e-66;1!UBERON:0006868;3.34e-66;1!UBERON:0006947;3.66e-23;3!UBERON:0004054;3.66e-23;3!UBERON:0005904;9.45e-18;4!UBERON:0000473;1.41e-09;8!UBERON:0000058;6.34e-08;10!UBERON:0003135;2.55e-07;11!UBERON:0003937;8.14e-07;12!UBERON:0005399;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,4.66e-66,1;UBERON:0006868,4.66e-66,1;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0005904,1.03e-17,4;UBERON:0002113,2.77e-11,26;UBERON:0003918,2.77e-11,26;UBERON:0011143,2.77e-11,26;UBERON:0005095,2.77e-11,26;UBERON:0007687,2.77e-11,26;UBERON:0000489,1.20e-09,31;UBERON:0000473,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12;UBERON:0003887,8.38e-07,12;UBERON:0006554,1.00e-06,47 | |||
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|short_description=p@chr19:20615031..20615039,- | |short_description=p@chr19:20615031..20615039,- | ||
}} | }} |
Latest revision as of 05:37, 26 July 2015
Short description: | p@chr19:20615031..20615039, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:20615031..20615039, - |
Coexpression cluster: | C3769_kidney_ductus_epididymis_seminal_renal_choriocarcinoma_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 4.66e-66 | 1 |
seminal fluid secreting gland | 4.66e-66 | 1 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
duct of male reproductive system | 1.03e-17 | 4 |
kidney | 2.77e-11 | 26 |
kidney mesenchyme | 2.77e-11 | 26 |
upper urinary tract | 2.77e-11 | 26 |
kidney rudiment | 2.77e-11 | 26 |
kidney field | 2.77e-11 | 26 |
cavitated compound organ | 1.20e-09 | 31 |
testis | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
intraembryonic coelom | 8.38e-07 | 12 |
urinary system structure | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.04e-34 | 2 |