FFCP PHASE1:Hg19::chr19:36066577..36066644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000516857_5end | |association_with_transcript=0bp_to_ENST00000516857_5end | ||
|cluster_id=chr19:36066577..36066644,+ | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_1_at_ENST00000516857_5end | |description=CAGE_peak_1_at_ENST00000516857_5end | ||
|id=chr19:36066577..36066644,+ | |id=chr19:36066577..36066644,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.59e-19!70;CL:0000557!4.63e-19!71;CL:0002057!7.70e-19!42;CL:0000766!6.58e-18!76;CL:0002009!1.18e-17!65;CL:0000860!1.91e-17!45;CL:0002194!1.63e-16!63;CL:0000576!1.63e-16!63;CL:0000040!1.63e-16!63;CL:0000559!1.63e-16!63;CL:0000763!4.03e-14!112;CL:0000049!4.03e-14!112 | |ontology_enrichment_celltype=CL:0000839!1.59e-19!70;CL:0000557!4.63e-19!71;CL:0002057!7.70e-19!42;CL:0000766!6.58e-18!76;CL:0002009!1.18e-17!65;CL:0000860!1.91e-17!45;CL:0002194!1.63e-16!63;CL:0000576!1.63e-16!63;CL:0000040!1.63e-16!63;CL:0000559!1.63e-16!63;CL:0000763!4.03e-14!112;CL:0000049!4.03e-14!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-19;33!CL:0002057;2.15e-19;33!CL:0000473;1.31e-17;39!CL:0000234;1.31e-17;39!CL:0000576;8.37e-12;48!CL:0000766;2.06e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.83e-22,48;CL:0000234,1.83e-22,48;CL:0000839,2.83e-22,66;CL:0000557,4.94e-22,67;CL:0000766,1.13e-20,72;CL:0000860,1.81e-20,42;CL:0002057,1.81e-20,42;CL:0002009,3.09e-20,61;CL:0002194,5.77e-19,59;CL:0000576,5.77e-19,59;CL:0000040,5.77e-19,59;CL:0000559,5.77e-19,59;CL:0000763,1.41e-15,108;CL:0000049,1.41e-15,108;CL:0002031,6.39e-08,120;CL:0000738,2.12e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.32e-17!80;UBERON:0001474!5.73e-16!86;UBERON:0002405!4.03e-13!115;UBERON:0002193!4.49e-13!112;UBERON:0002390!5.00e-13!102;UBERON:0003061!5.00e-13!102;UBERON:0004765!2.03e-12!101;UBERON:0001434!2.03e-12!101;UBERON:0002204!1.18e-11!167;UBERON:0003081!1.11e-09!216 | |ontology_enrichment_uberon=UBERON:0002371!3.32e-17!80;UBERON:0001474!5.73e-16!86;UBERON:0002405!4.03e-13!115;UBERON:0002193!4.49e-13!112;UBERON:0002390!5.00e-13!102;UBERON:0003061!5.00e-13!102;UBERON:0004765!2.03e-12!101;UBERON:0001434!2.03e-12!101;UBERON:0002204!1.18e-11!167;UBERON:0003081!1.11e-09!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.58e-20,76;UBERON:0001474,5.97e-18,82;UBERON:0002405,4.02e-16,93;UBERON:0004765,1.01e-15,90;UBERON:0002390,2.54e-14,98;UBERON:0003061,2.54e-14,98;UBERON:0002193,3.12e-14,108;UBERON:0001434,2.33e-13,100;UBERON:0002204,7.01e-13,167;UBERON:0003081,8.54e-12,203 | |||
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| ||
|short_description=p1@ENST00000516857 | |short_description=p1@ENST00000516857 | ||
}} | }} |
Latest revision as of 06:45, 26 July 2015
Short description: | p1@ENST00000516857 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000516857_5end |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000516857_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.83e-22 | 48 |
phagocyte | 1.83e-22 | 48 |
myeloid lineage restricted progenitor cell | 2.83e-22 | 66 |
granulocyte monocyte progenitor cell | 4.94e-22 | 67 |
myeloid leukocyte | 1.13e-20 | 72 |
classical monocyte | 1.81e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-20 | 42 |
macrophage dendritic cell progenitor | 3.09e-20 | 61 |
monopoietic cell | 5.77e-19 | 59 |
monocyte | 5.77e-19 | 59 |
monoblast | 5.77e-19 | 59 |
promonocyte | 5.77e-19 | 59 |
myeloid cell | 1.41e-15 | 108 |
common myeloid progenitor | 1.41e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 6.39e-08 | 120 |
leukocyte | 2.12e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.58e-20 | 76 |
bone element | 5.97e-18 | 82 |
immune system | 4.02e-16 | 93 |
skeletal element | 1.01e-15 | 90 |
hematopoietic system | 2.54e-14 | 98 |
blood island | 2.54e-14 | 98 |
hemolymphoid system | 3.12e-14 | 108 |
skeletal system | 2.33e-13 | 100 |
musculoskeletal system | 7.01e-13 | 167 |
lateral plate mesoderm | 8.54e-12 | 203 |