FFCP PHASE1:Hg19::chr19:43965819..43965850,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:43965819..43965850,- | |||
|coexpression_cluster_id=C1454 | |||
|description=CAGE_peak_at_chr19:43965819..43965850,- | |description=CAGE_peak_at_chr19:43965819..43965850,- | ||
|id=chr19:43965819..43965850,- | |id=chr19:43965819..43965850,- | ||
|ontology_enrichment_celltype=CL:0000860!1.11e-09!45;CL:0002057!1.92e-08!42;CL:0002076!6.42e-08!43;CL:0000349!4.42e-07!3;CL:0002577!4.42e-07!3;CL:0002621!8.53e-07!3 | |ontology_enrichment_celltype=CL:0000860!1.11e-09!45;CL:0002057!1.92e-08!42;CL:0002076!6.42e-08!43;CL:0000349!4.42e-07!3;CL:0002577!4.42e-07!3;CL:0002621!8.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000317;7.03e-08;2!CL:1000448;7.03e-08;2!CL:0002308;7.03e-08;2!CL:0002140;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.37e-08,2;CL:1000448,5.37e-08,2;CL:0002308,5.37e-08,2;CL:0002140,5.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.42e-15;1!UBERON:0008814;3.56e-08;2!UBERON:0010056;3.56e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.49e-10!14;UBERON:0000158!4.49e-10!14;UBERON:0003124!1.45e-09!7;UBERON:0001987!2.69e-08!4;UBERON:0004340!2.69e-08!4;UBERON:0000161!4.76e-08!35;UBERON:0004119!2.79e-07!169;UBERON:0000925!2.79e-07!169;UBERON:0006595!2.79e-07!169;UBERON:0001949!8.53e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;7.93e-19;3!UBERON:0001033;7.93e-19;3!UBERON:0007029;6.21e-15;1!UBERON:0002372;1.84e-14;1!UBERON:0001961;1.84e-14;1!UBERON:0001744;1.84e-14;1!UBERON:0001042;1.84e-14;1!UBERON:0001735;1.84e-14;1!UBERON:0000341;4.85e-08;2!UBERON:0002419;7.03e-08;2!UBERON:0006562;7.03e-08;2!UBERON:0007771;7.03e-08;2!UBERON:0003297;7.03e-08;2!UBERON:0001821;7.03e-08;2!UBERON:0003487;7.03e-08;2!UBERON:0001820;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,7.26e-19,3;UBERON:0001033,7.26e-19,3;UBERON:0010056,7.26e-19,3;UBERON:0007029,6.22e-15,1;UBERON:0002372,2.11e-14,1;UBERON:0001961,2.11e-14,1;UBERON:0001744,2.11e-14,1;UBERON:0001735,2.11e-14,1;UBERON:0001042,1.38e-12,10;UBERON:0009145,1.38e-12,10;UBERON:0006562,1.70e-11,11;UBERON:0000341,4.69e-08,2;UBERON:0002419,5.37e-08,2;UBERON:0007771,5.37e-08,2;UBERON:0003297,5.37e-08,2;UBERON:0001821,5.37e-08,2;UBERON:0003487,5.37e-08,2;UBERON:0001820,5.37e-08,2;UBERON:0005089,5.37e-08,2;UBERON:0005088,5.37e-08,2;UBERON:0001557,7.05e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0.306083892370903,1.28371610830437,0.639337125799041,0,0,0,1.7412554317715,0.56738522469114,2.4912889959823,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.703702806881416,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,3.36942951335251,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.557694977114413,1.00035336054936,0,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.0967563312890851,0.0730893170861856,0,6.78923115418936,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0,0,0,0,0.0636471582781649,0,8.27323642008453,1.36893320434112,1.34704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,0,0,1.35426486594342,0.376484679085209,0.272906150057846,0,0.306083892370903,1.28371610830437,0.639337125799041,0,0,0,1.7412554317715,0.56738522469114,2.4912889959823,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.703702806881416,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432359860250884,0,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0.303127571446259,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0,0,3.36942951335251,0.886860307073351,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.557694977114413,1.00035336054936,0,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.0967563312890851,0.0730893170861856,0,6.78923115418936,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55880778281177,0,0,0,0,0.0636471582781649,0,8.27323642008453,1.36893320434112,1.34704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr19:43965819..43965850,- | |short_description=p@chr19:43965819..43965850,- | ||
}} | }} |
Latest revision as of 14:26, 27 July 2015
Short description: | p@chr19:43965819..43965850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:43965819..43965850, - |
Coexpression cluster: | C1454_tongue_esophagus_CD14_throat_skin_amniotic_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.37e-08 | 2 |
epithelial cell of sweat gland | 5.37e-08 | 2 |
epithelial cell of skin gland | 5.37e-08 | 2 |
acinar cell of sebaceous gland | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 7.26e-19 | 3 |
gustatory system | 7.26e-19 | 3 |
future tongue | 7.26e-19 | 3 |
surface | 6.22e-15 | 1 |
tonsil | 2.11e-14 | 1 |
mucosa-associated lymphoid tissue | 2.11e-14 | 1 |
lymphoid tissue | 2.11e-14 | 1 |
tonsillar ring | 2.11e-14 | 1 |
chordate pharynx | 1.38e-12 | 10 |
pharyngeal region of foregut | 1.38e-12 | 10 |
pharynx | 1.70e-11 | 11 |
throat | 4.69e-08 | 2 |
skin gland | 5.37e-08 | 2 |
epidermis gland | 5.37e-08 | 2 |
gland of integumental system | 5.37e-08 | 2 |
sebaceous gland | 5.37e-08 | 2 |
skin sebaceous gland | 5.37e-08 | 2 |
sweat gland | 5.37e-08 | 2 |
sweat gland placode | 5.37e-08 | 2 |
sebaceous gland placode | 5.37e-08 | 2 |
upper respiratory tract | 7.05e-07 | 19 |