FFCP PHASE1:Hg19::chr19:43965871..43965896,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:43965871..43965896,- | |||
|coexpression_cluster_id=C1454 | |||
|description=CAGE_peak_at_chr19:43965871..43965896,- | |description=CAGE_peak_at_chr19:43965871..43965896,- | ||
|id=chr19:43965871..43965896,- | |id=chr19:43965871..43965896,- | ||
|ontology_enrichment_celltype=CL:0000860!1.01e-16!45;CL:0002057!5.53e-14!42;CL:0000557!9.12e-13!71;CL:0002009!1.76e-12!65;CL:0000839!8.26e-11!70;CL:0002194!9.46e-11!63;CL:0000576!9.46e-11!63;CL:0000040!9.46e-11!63;CL:0000559!9.46e-11!63;CL:0000766!2.08e-09!76 | |ontology_enrichment_celltype=CL:0000860!1.01e-16!45;CL:0002057!5.53e-14!42;CL:0000557!9.12e-13!71;CL:0002009!1.76e-12!65;CL:0000839!8.26e-11!70;CL:0002194!9.46e-11!63;CL:0000576!9.46e-11!63;CL:0000040!9.46e-11!63;CL:0000559!9.46e-11!63;CL:0000766!2.08e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.00e-14;2!CL:0000860;1.46e-11;33!CL:0002057;1.46e-11;33!CL:0000244;8.38e-08;4!CL:0000731;8.38e-08;4!CL:0000473;2.63e-07;39!CL:0000234;2.63e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.80e-14,2;CL:0000860,2.34e-09,42;CL:0002057,2.34e-09,42;CL:0000473,4.74e-08,48;CL:0000234,4.74e-08,48;CL:0000244,6.94e-08,4;CL:0000731,6.94e-08,4;CL:0002009,1.29e-07,61;CL:0000557,7.98e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.13e-08;1!UBERON:0000358;2.25e-08;1!UBERON:0004874;4.72e-08;1 | |||
|ontology_enrichment_disease=DOID:5093!1.37e-07!4;DOID:1612!1.37e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.82e-10!80;UBERON:0002390!2.37e-09!102;UBERON:0003061!2.37e-09!102;UBERON:0001474!3.23e-09!86;UBERON:0002193!1.50e-08!112;UBERON:0004765!1.77e-07!101;UBERON:0001434!1.77e-07!101;UBERON:0002405!2.04e-07!115;UBERON:0005631!2.20e-07!14;UBERON:0000158!2.20e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.06e-10;3!UBERON:0001033;1.06e-10;3!UBERON:0007029;1.05e-08;1!UBERON:0005795;4.72e-08;1!UBERON:0000989;4.72e-08;1!UBERON:0008811;4.72e-08;1!UBERON:0000964;8.38e-08;4!UBERON:0010409;8.38e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.11e-10,3;UBERON:0001033,1.11e-10,3;UBERON:0010056,1.11e-10,3;UBERON:0007029,1.05e-08,1;UBERON:0000989,4.41e-08,1;UBERON:0008811,4.41e-08,1;UBERON:0006258,4.41e-08,1;UBERON:0005876,4.41e-08,1;UBERON:0004874,4.41e-08,1;UBERON:0000964,1.12e-07,4;UBERON:0010409,1.12e-07,4;UBERON:0004348,1.12e-07,4;UBERON:0005427,1.12e-07,4 | |||
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| ||
|short_description=p@chr19:43965871..43965896,- | |short_description=p@chr19:43965871..43965896,- | ||
}} | }} |
Latest revision as of 14:26, 27 July 2015
Short description: | p@chr19:43965871..43965896, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:43965871..43965896, - |
Coexpression cluster: | C1454_tongue_esophagus_CD14_throat_skin_amniotic_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.80e-14 | 2 |
classical monocyte | 2.34e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-09 | 42 |
defensive cell | 4.74e-08 | 48 |
phagocyte | 4.74e-08 | 48 |
transitional epithelial cell | 6.94e-08 | 4 |
urothelial cell | 6.94e-08 | 4 |
macrophage dendritic cell progenitor | 1.29e-07 | 61 |
granulocyte monocyte progenitor cell | 7.98e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.11e-10 | 3 |
gustatory system | 1.11e-10 | 3 |
future tongue | 1.11e-10 | 3 |
surface | 1.05e-08 | 1 |
penis | 4.41e-08 | 1 |
intromittent organ | 4.41e-08 | 1 |
lateral plate mesenchyme | 4.41e-08 | 1 |
undifferentiated genital tubercle | 4.41e-08 | 1 |
somatopleure | 4.41e-08 | 1 |
cornea | 1.12e-07 | 4 |
eye surface | 1.12e-07 | 4 |
optic eminence | 1.12e-07 | 4 |
corneal primordium | 1.12e-07 | 4 |