FFCP PHASE1:Hg19::chr19:43967341..43967352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:43967341..43967352,- | |||
|coexpression_cluster_id=C1454 | |coexpression_cluster_id=C1454 | ||
|description=CAGE_peak_at_chr19:43967341..43967352,- | |description=CAGE_peak_at_chr19:43967341..43967352,- | ||
|id=chr19:43967341..43967352,- | |id=chr19:43967341..43967352,- | ||
|ontology_enrichment_celltype=CL:0000860!1.66e-13!45;CL:0002057!8.66e-12!42;CL:0002009!9.42e-10!65;CL:0000557!7.24e-09!71;CL:0002087!1.19e-08!119;CL:0002194!1.20e-08!63;CL:0000576!1.20e-08!63;CL:0000040!1.20e-08!63;CL:0000559!1.20e-08!63;CL:0000066!1.42e-08!254;CL:0000738!4.66e-08!140;CL:0002031!9.36e-08!124;CL:0000839!1.28e-07!70;CL:0002159!1.95e-07!13;CL:0000766!4.49e-07!76 | |ontology_enrichment_celltype=CL:0000860!1.66e-13!45;CL:0002057!8.66e-12!42;CL:0002009!9.42e-10!65;CL:0000557!7.24e-09!71;CL:0002087!1.19e-08!119;CL:0002194!1.20e-08!63;CL:0000576!1.20e-08!63;CL:0000040!1.20e-08!63;CL:0000559!1.20e-08!63;CL:0000066!1.42e-08!254;CL:0000738!4.66e-08!140;CL:0002031!9.36e-08!124;CL:0000839!1.28e-07!70;CL:0002159!1.95e-07!13;CL:0000766!4.49e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.23e-22;33!CL:0002057;4.23e-22;33!CL:0000473;1.58e-14;39!CL:0000234;1.58e-14;39!CL:0000575;2.89e-11;2!CL:0000622;1.06e-09;5!CL:0000576;1.42e-09;48!CL:0000154;3.70e-08;6!CL:0002623;1.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.94e-19,42;CL:0002057,9.94e-19,42;CL:0000473,4.84e-16,48;CL:0000234,4.84e-16,48;CL:0002194,2.76e-12,59;CL:0000576,2.76e-12,59;CL:0000040,2.76e-12,59;CL:0000559,2.76e-12,59;CL:0002009,8.41e-12,61;CL:0000575,2.17e-11,2;CL:0000839,1.02e-10,66;CL:0000557,1.60e-10,67;CL:0000622,1.07e-09,5;CL:0000766,1.28e-09,72;CL:0000154,3.70e-08,6;CL:0002623,1.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.25e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!8.84e-10!72;UBERON:0005631!3.66e-09!14;UBERON:0000158!3.66e-09!14;UBERON:0001737!4.35e-09!9;UBERON:0000065!1.30e-08!53;UBERON:0001557!4.86e-08!19;UBERON:0000072!1.93e-07!46;UBERON:0004119!3.70e-07!169;UBERON:0000925!3.70e-07!169;UBERON:0006595!3.70e-07!169;UBERON:0005910!4.29e-07!6;UBERON:0002371!5.98e-07!80 | |ontology_enrichment_uberon=UBERON:0001004!8.84e-10!72;UBERON:0005631!3.66e-09!14;UBERON:0000158!3.66e-09!14;UBERON:0001737!4.35e-09!9;UBERON:0000065!1.30e-08!53;UBERON:0001557!4.86e-08!19;UBERON:0000072!1.93e-07!46;UBERON:0004119!3.70e-07!169;UBERON:0000925!3.70e-07!169;UBERON:0006595!3.70e-07!169;UBERON:0005910!4.29e-07!6;UBERON:0002371!5.98e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.87e-08;3!UBERON:0001033;2.87e-08;3!UBERON:0001043;8.62e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.55e-09,76;UBERON:0001723,2.87e-08,3;UBERON:0001033,2.87e-08,3;UBERON:0010056,2.87e-08,3;UBERON:0001474,3.83e-08,82;UBERON:0001043,1.04e-07,3;UBERON:0009143,1.04e-07,3;UBERON:0004765,3.36e-07,90;UBERON:0002405,6.87e-07,93 | |||
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| ||
|short_description=p@chr19:43967341..43967352,- | |short_description=p@chr19:43967341..43967352,- | ||
}} | }} |
Latest revision as of 14:26, 27 July 2015
Short description: | p@chr19:43967341..43967352, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:43967341..43967352, - |
Coexpression cluster: | C1454_tongue_esophagus_CD14_throat_skin_amniotic_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.94e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.94e-19 | 42 |
defensive cell | 4.84e-16 | 48 |
phagocyte | 4.84e-16 | 48 |
monopoietic cell | 2.76e-12 | 59 |
monocyte | 2.76e-12 | 59 |
monoblast | 2.76e-12 | 59 |
promonocyte | 2.76e-12 | 59 |
macrophage dendritic cell progenitor | 8.41e-12 | 61 |
corneal epithelial cell | 2.17e-11 | 2 |
myeloid lineage restricted progenitor cell | 1.02e-10 | 66 |
granulocyte monocyte progenitor cell | 1.60e-10 | 67 |
acinar cell | 1.07e-09 | 5 |
myeloid leukocyte | 1.28e-09 | 72 |
protein secreting cell | 3.70e-08 | 6 |
acinar cell of salivary gland | 1.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.55e-09 | 76 |
tongue | 2.87e-08 | 3 |
gustatory system | 2.87e-08 | 3 |
future tongue | 2.87e-08 | 3 |
bone element | 3.83e-08 | 82 |
esophagus | 1.04e-07 | 3 |
esophageal region | 1.04e-07 | 3 |
skeletal element | 3.36e-07 | 90 |
immune system | 6.87e-07 | 93 |