FFCP PHASE1:Hg19::chr19:49931280..49931295,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49931280..49931295,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr19:49931280..49931295,+ | |description=CAGE_peak_at_chr19:49931280..49931295,+ | ||
|id=chr19:49931280..49931295,+ | |id=chr19:49931280..49931295,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.81e-13!5;CL:0000242!9.82e-10!2 | |ontology_enrichment_celltype=CL:0002322!1.81e-13!5;CL:0000242!9.82e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.92e-07;4!CL:0002222;1.92e-07;4!CL:0002224;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.92e-07,4;CL:0002222,1.92e-07,4;CL:0002224,1.92e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!7.00e-59!22;UBERON:0000956!1.38e-51!25;UBERON:0000203!1.38e-51!25;UBERON:0001950!1.16e-50!20;UBERON:0001869!2.32e-49!32;UBERON:0001893!2.92e-46!34;UBERON:0002791!5.21e-43!33;UBERON:0002020!1.19e-41!34;UBERON:0003528!1.19e-41!34;UBERON:0002780!9.69e-38!41;UBERON:0001890!9.69e-38!41;UBERON:0006240!9.69e-38!41;UBERON:0003080!9.49e-37!42;UBERON:0001049!7.44e-32!57;UBERON:0005068!7.44e-32!57;UBERON:0006241!7.44e-32!57;UBERON:0007135!7.44e-32!57;UBERON:0002616!1.29e-30!59;UBERON:0000955!1.79e-30!69;UBERON:0006238!1.79e-30!69;UBERON:0001017!7.10e-30!82;UBERON:0000073!2.07e-29!94;UBERON:0001016!2.07e-29!94;UBERON:0005743!3.11e-28!86;UBERON:0003056!8.51e-27!61;UBERON:0000200!6.68e-26!6;UBERON:0003075!1.30e-21!86;UBERON:0007284!1.30e-21!86;UBERON:0002346!2.03e-20!90;UBERON:0001871!2.41e-19!7;UBERON:0000033!4.60e-18!123;UBERON:0004121!8.73e-18!169;UBERON:0000924!3.21e-17!173;UBERON:0006601!3.21e-17!173;UBERON:0000153!5.89e-17!129;UBERON:0007811!5.89e-17!129;UBERON:0001872!1.28e-14!5;UBERON:0000349!1.28e-14!5;UBERON:0002771!9.13e-14!3;UBERON:0007023!2.36e-13!115;UBERON:0001954!2.32e-10!2;UBERON:0003022!2.32e-10!2;UBERON:0002421!2.32e-10!2;UBERON:0002600!2.32e-10!2;UBERON:0001870!3.66e-10!2;UBERON:0002021!1.33e-08!5;UBERON:0000064!1.96e-08!219;UBERON:0000025!1.64e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.32e-19;20!UBERON:0002619;1.00e-17;22!UBERON:0000956;9.69e-16;25!UBERON:0000203;9.69e-16;25!UBERON:0002702;1.37e-13;2!UBERON:0002791;3.36e-12;32!UBERON:0000922;3.48e-12;49!UBERON:0001869;4.89e-12;32!UBERON:0003528;1.22e-11;34!UBERON:0002020;1.22e-11;34!UBERON:0002114;1.10e-09;2!UBERON:0001893;1.39e-09;34!UBERON:0001870;1.67e-09;3!UBERON:0002780;8.57e-09;41!UBERON:0001890;8.57e-09;41!UBERON:0000955;6.37e-08;68!UBERON:0010077;1.92e-07;4!UBERON:0005389;1.92e-07;4!UBERON:0000484;1.92e-07;4!UBERON:0000965;1.92e-07;4!UBERON:0001803;1.92e-07;4!UBERON:0000073;9.98e-07;53!UBERON:0002616;9.98e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.22e-19,20;UBERON:0002619,9.62e-18,22;UBERON:0000956,9.32e-16,25;UBERON:0000203,9.32e-16,25;UBERON:0002702,1.21e-13,2;UBERON:0002791,1.62e-12,32;UBERON:0001869,1.62e-12,32;UBERON:0003528,7.91e-12,34;UBERON:0002020,7.91e-12,34;UBERON:0001893,7.91e-12,34;UBERON:0001017,7.40e-11,81;UBERON:0003056,2.94e-10,61;UBERON:0002780,6.28e-10,41;UBERON:0001890,6.28e-10,41;UBERON:0003080,6.28e-10,41;UBERON:0006240,6.28e-10,41;UBERON:0001016,8.41e-10,89;UBERON:0002114,1.10e-09,2;UBERON:0001870,1.54e-09,3;UBERON:0000955,4.01e-09,68;UBERON:0006238,4.01e-09,68;UBERON:0000073,8.31e-08,53;UBERON:0002616,8.31e-08,53;UBERON:0003075,1.04e-07,82;UBERON:0007284,1.04e-07,82;UBERON:0010077,1.92e-07,4;UBERON:0005389,1.92e-07,4;UBERON:0000484,1.92e-07,4;UBERON:0002546,1.92e-07,4;UBERON:0000965,1.92e-07,4;UBERON:0001803,1.92e-07,4;UBERON:0003073,1.92e-07,4;UBERON:0005426,1.92e-07,4;UBERON:0001049,2.05e-07,56;UBERON:0005068,2.05e-07,56;UBERON:0006241,2.05e-07,56;UBERON:0007135,2.05e-07,56;UBERON:0002346,2.32e-07,86;UBERON:0004121,6.00e-07,171;UBERON:0000924,6.00e-07,171;UBERON:0006601,6.00e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,9.98068990005971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.221856366416,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0,10.3349395450904,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,10.3925213713462,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.271965960763659,13.0905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,9.98068990005971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.221856366416,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0,10.3349395450904,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,10.3925213713462,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0.271965960763659,13.0905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:49931280..49931295,+ | |short_description=p@chr19:49931280..49931295,+ | ||
}} | }} |
Latest revision as of 16:03, 27 July 2015
Short description: | p@chr19:49931280..49931295, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49931280..49931295, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.92e-07 | 4 |
vertebrate lens cell | 1.92e-07 | 4 |
lens epithelial cell | 1.92e-07 | 4 |