FFCP PHASE1:Hg19::chr19:6067480..6067495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6067480..6067495,+ | |||
|coexpression_cluster_id=C512 | |||
|description=CAGE_peak_at_chr19:6067480..6067495,+ | |description=CAGE_peak_at_chr19:6067480..6067495,+ | ||
|id=chr19:6067480..6067495,+ | |id=chr19:6067480..6067495,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.57e-27!42;CL:0000766!1.06e-26!76;CL:0000763!1.98e-26!112;CL:0000049!1.98e-26!112;CL:0000860!1.61e-24!45;CL:0000557!6.22e-23!71;CL:0002009!1.14e-19!65;CL:0000839!1.46e-19!70;CL:0000738!4.85e-19!140;CL:0000037!1.40e-18!172;CL:0000566!1.40e-18!172;CL:0002393!1.03e-17!9;CL:0002397!1.03e-17!9;CL:0000988!6.48e-17!182;CL:0002194!8.30e-17!63;CL:0000576!8.30e-17!63;CL:0000040!8.30e-17!63;CL:0000559!8.30e-17!63;CL:0002032!1.82e-16!165;CL:0000837!1.82e-16!165;CL:0000134!1.01e-11!358;CL:0002031!1.13e-11!124;CL:0002320!3.24e-11!365;CL:0000767!1.65e-09!3;CL:0000219!1.90e-09!390;CL:0002087!2.84e-09!119;CL:0000094!6.51e-09!8;CL:0000453!2.02e-08!5;CL:0000875!4.17e-08!3;CL:0002396!4.17e-08!3;CL:0000048!7.25e-08!430;CL:0000034!9.82e-08!444;CL:0000723!1.46e-07!436;CL:0001014!7.40e-07!2;CL:0001016!7.40e-07!2;CL:0000771!9.47e-07!2 | |ontology_enrichment_celltype=CL:0002057!9.57e-27!42;CL:0000766!1.06e-26!76;CL:0000763!1.98e-26!112;CL:0000049!1.98e-26!112;CL:0000860!1.61e-24!45;CL:0000557!6.22e-23!71;CL:0002009!1.14e-19!65;CL:0000839!1.46e-19!70;CL:0000738!4.85e-19!140;CL:0000037!1.40e-18!172;CL:0000566!1.40e-18!172;CL:0002393!1.03e-17!9;CL:0002397!1.03e-17!9;CL:0000988!6.48e-17!182;CL:0002194!8.30e-17!63;CL:0000576!8.30e-17!63;CL:0000040!8.30e-17!63;CL:0000559!8.30e-17!63;CL:0002032!1.82e-16!165;CL:0000837!1.82e-16!165;CL:0000134!1.01e-11!358;CL:0002031!1.13e-11!124;CL:0002320!3.24e-11!365;CL:0000767!1.65e-09!3;CL:0000219!1.90e-09!390;CL:0002087!2.84e-09!119;CL:0000094!6.51e-09!8;CL:0000453!2.02e-08!5;CL:0000875!4.17e-08!3;CL:0002396!4.17e-08!3;CL:0000048!7.25e-08!430;CL:0000034!9.82e-08!444;CL:0000723!1.46e-07!436;CL:0001014!7.40e-07!2;CL:0001016!7.40e-07!2;CL:0000771!9.47e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;4.79e-33;8!CL:0000767;1.08e-32;3!CL:0000081;4.77e-24;11!CL:0001014;3.34e-22;2!CL:0001016;3.34e-22;2!CL:0000771;6.01e-22;2!CL:0000097;5.21e-20;5!CL:0000163;2.22e-11;9!CL:0000766;4.56e-10;69!CL:0000453;1.87e-09;5!CL:0000840;5.08e-08;5!CL:0002393;6.60e-08;6!CL:0002397;6.60e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.96e-33,8;CL:0000767,1.02e-32,3;CL:0000081,4.89e-24,11;CL:0000766,1.78e-22,72;CL:0001014,2.56e-22,2;CL:0001016,2.56e-22,2;CL:0000771,6.69e-22,2;CL:0000097,5.74e-20,5;CL:0002028,5.74e-20,5;CL:0000763,1.29e-19,108;CL:0000049,1.29e-19,108;CL:0000738,2.07e-17,136;CL:0000557,4.03e-14,67;CL:0000037,1.12e-13,168;CL:0000988,7.23e-13,177;CL:0002032,1.77e-12,161;CL:0000837,1.77e-12,161;CL:0000163,2.34e-11,9;CL:0002393,5.77e-11,9;CL:0002397,5.77e-11,9;CL:0000453,1.69e-09,5;CL:0000839,3.98e-09,66;CL:0000840,4.66e-08,5;CL:0001029,4.66e-08,5;CL:0002009,1.31e-07,61;CL:0002031,2.53e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.08e-26!102;UBERON:0003061!1.08e-26!102;UBERON:0002193!2.21e-23!112;UBERON:0002371!1.16e-22!80;UBERON:0001474!1.71e-20!86;UBERON:0004765!1.61e-17!101;UBERON:0001434!1.61e-17!101;UBERON:0002405!2.68e-14!115;UBERON:0002384!1.58e-10!375;UBERON:0003081!2.15e-09!216;UBERON:0000178!7.13e-08!15;UBERON:0000179!7.13e-08!15;UBERON:0000463!7.13e-08!15;UBERON:0002204!1.98e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.45e-07;15!UBERON:0000179;9.45e-07;15!UBERON:0000463;9.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.91e-16,98;UBERON:0003061,5.91e-16,98;UBERON:0002193,2.58e-14,108;UBERON:0002371,2.61e-12,76;UBERON:0001474,2.55e-11,82;UBERON:0004765,3.34e-10,90;UBERON:0002405,7.84e-10,93;UBERON:0001434,4.71e-09,100;UBERON:0000178,9.94e-07,15;UBERON:0000179,9.94e-07,15;UBERON:0000463,9.94e-07,15 | |||
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| ||
|short_description=p@chr19:6067480..6067495,+ | |short_description=p@chr19:6067480..6067495,+ | ||
}} | }} |
Latest revision as of 18:02, 27 July 2015
Short description: | p@chr19:6067480..6067495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6067480..6067495, + |
Coexpression cluster: | C512_Mast_immature_Basophils_CD14_CD34_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.96e-33 | 8 |
basophil | 1.02e-32 | 3 |
blood cell | 4.89e-24 | 11 |
myeloid leukocyte | 1.78e-22 | 72 |
CD1a-positive Langerhans cell | 2.56e-22 | 2 |
immature CD1a-positive Langerhans cell | 2.56e-22 | 2 |
eosinophil | 6.69e-22 | 2 |
mast cell | 5.74e-20 | 5 |
basophil mast progenitor cell | 5.74e-20 | 5 |
myeloid cell | 1.29e-19 | 108 |
common myeloid progenitor | 1.29e-19 | 108 |
leukocyte | 2.07e-17 | 136 |
granulocyte monocyte progenitor cell | 4.03e-14 | 67 |
hematopoietic stem cell | 1.12e-13 | 168 |
hematopoietic cell | 7.23e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-12 | 161 |
endocrine cell | 2.34e-11 | 9 |
intermediate monocyte | 5.77e-11 | 9 |
CD14-positive, CD16-positive monocyte | 5.77e-11 | 9 |
Langerhans cell | 1.69e-09 | 5 |
myeloid lineage restricted progenitor cell | 3.98e-09 | 66 |
immature conventional dendritic cell | 4.66e-08 | 5 |
common dendritic progenitor | 4.66e-08 | 5 |
macrophage dendritic cell progenitor | 1.31e-07 | 61 |
hematopoietic lineage restricted progenitor cell | 2.53e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.91e-16 | 98 |
blood island | 5.91e-16 | 98 |
hemolymphoid system | 2.58e-14 | 108 |
bone marrow | 2.61e-12 | 76 |
bone element | 2.55e-11 | 82 |
skeletal element | 3.34e-10 | 90 |
immune system | 7.84e-10 | 93 |
skeletal system | 4.71e-09 | 100 |
blood | 9.94e-07 | 15 |
haemolymphatic fluid | 9.94e-07 | 15 |
organism substance | 9.94e-07 | 15 |