FFCP PHASE1:Hg19::chr1:13943668..13943672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:13943668..13943672,+ | |||
|description=CAGE_peak_at_chr1:13943668..13943672,+ | |description=CAGE_peak_at_chr1:13943668..13943672,+ | ||
|id=chr1:13943668..13943672,+ | |id=chr1:13943668..13943672,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002144;5.78e-07;3!CL:0000540;7.20e-07;6!CL:0000404;7.20e-07;6!CL:0000349;7.88e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.83e-07,3;CL:0000349,6.50e-07,19;CL:0000047,7.66e-07,8;CL:0002504,9.90e-07,3;CL:1000279,9.90e-07,3;CL:1000280,9.90e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;7.20e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!2.67e-08!14 | |ontology_enrichment_disease=DOID:2394!2.67e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.77e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.09e-09!659;UBERON:0000922!8.18e-08!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.99e-07;9!UBERON:0000042;4.99e-07;9!UBERON:0010523;5.78e-07;3!UBERON:0001915;5.78e-07;3!UBERON:0001982;5.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.83e-07,3;UBERON:0001915,5.83e-07,3;UBERON:0001982,5.83e-07,3 | |||
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| ||
|short_description=p@chr1:13943668..13943672,+ | |short_description=p@chr1:13943668..13943672,+ | ||
}} | }} |
Latest revision as of 20:36, 27 July 2015
Short description: | p@chr1:13943668..13943672, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:13943668..13943672, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.83e-07 | 3 |
extraembryonic cell | 6.50e-07 | 19 |
neuronal stem cell | 7.66e-07 | 8 |
enteric smooth muscle cell | 9.90e-07 | 3 |
smooth muscle cell of large intestine | 9.90e-07 | 3 |
smooth muscle cell of colon | 9.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.83e-07 | 3 |
endothelium of capillary | 5.83e-07 | 3 |
capillary | 5.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-10 | 14 |