FFCP PHASE1:Hg19::chr1:160605219..160605230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160605219..160605230,- | |||
|coexpression_cluster_id=C1715 | |||
|description=CAGE_peak_at_chr1:160605219..160605230,- | |description=CAGE_peak_at_chr1:160605219..160605230,- | ||
|id=chr1:160605219..160605230,- | |id=chr1:160605219..160605230,- | ||
|ontology_enrichment_celltype=CL:0000838!1.15e-27!52;CL:0000542!5.08e-27!53;CL:0000051!5.08e-27!53;CL:0002087!1.92e-23!119;CL:0000738!2.81e-21!140;CL:0002031!2.46e-19!124;CL:0000988!1.28e-18!182;CL:0000624!2.22e-18!6;CL:0000084!1.41e-17!25;CL:0000827!1.41e-17!25;CL:0000037!1.20e-16!172;CL:0000566!1.20e-16!172;CL:0002032!2.00e-14!165;CL:0000837!2.00e-14!165;CL:0000791!3.79e-12!18;CL:0000789!3.79e-12!18;CL:0002420!3.79e-12!18;CL:0002419!3.79e-12!18;CL:0000790!3.79e-12!18;CL:0000080!3.90e-12!6;CL:0000898!5.16e-10!3;CL:0000623!2.88e-09!3;CL:0000825!2.88e-09!3;CL:0000815!2.58e-07!2;CL:0000792!2.58e-07!2;CL:0002677!2.58e-07!2;CL:0000945!3.14e-07!24;CL:0000826!3.14e-07!24 | |ontology_enrichment_celltype=CL:0000838!1.15e-27!52;CL:0000542!5.08e-27!53;CL:0000051!5.08e-27!53;CL:0002087!1.92e-23!119;CL:0000738!2.81e-21!140;CL:0002031!2.46e-19!124;CL:0000988!1.28e-18!182;CL:0000624!2.22e-18!6;CL:0000084!1.41e-17!25;CL:0000827!1.41e-17!25;CL:0000037!1.20e-16!172;CL:0000566!1.20e-16!172;CL:0002032!2.00e-14!165;CL:0000837!2.00e-14!165;CL:0000791!3.79e-12!18;CL:0000789!3.79e-12!18;CL:0002420!3.79e-12!18;CL:0002419!3.79e-12!18;CL:0000790!3.79e-12!18;CL:0000080!3.90e-12!6;CL:0000898!5.16e-10!3;CL:0000623!2.88e-09!3;CL:0000825!2.88e-09!3;CL:0000815!2.58e-07!2;CL:0000792!2.58e-07!2;CL:0002677!2.58e-07!2;CL:0000945!3.14e-07!24;CL:0000826!3.14e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000946;6.05e-13;1!CL:0000786;6.05e-13;1!CL:0000815;4.17e-07;2!CL:0000792;4.17e-07;2!CL:0002677;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.73e-13,1;CL:0000786,9.73e-13,1;CL:0000980,9.73e-13,1;CL:0000815,4.69e-07,2;CL:0000792,4.69e-07,2;CL:0002677,4.69e-07,2;CL:0000785,5.28e-07,2;CL:0000955,5.28e-07,2;CL:0000818,5.28e-07,2;CL:0000954,5.28e-07,2;CL:0000816,5.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;4.17e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.02e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.02e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:630;2.32e-13;1!DOID:0050177;2.32e-13;1!DOID:0050427;2.32e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.62e-13,1;DOID:0050177,2.62e-13,1;DOID:0050427,2.62e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.03e-12!15;UBERON:0000179!8.03e-12!15;UBERON:0000463!8.03e-12!15;UBERON:0002390!1.42e-08!102;UBERON:0003061!1.42e-08!102;UBERON:0002193!3.34e-08!112;UBERON:0002370!4.81e-07!4;UBERON:0005058!4.81e-07!4;UBERON:0009113!4.81e-07!4;UBERON:0003295!4.81e-07!4;UBERON:0005562!4.81e-07!4;UBERON:0004177!5.89e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!8.03e-12!15;UBERON:0000179!8.03e-12!15;UBERON:0000463!8.03e-12!15;UBERON:0002390!1.42e-08!102;UBERON:0003061!1.42e-08!102;UBERON:0002193!3.34e-08!112;UBERON:0002370!4.81e-07!4;UBERON:0005058!4.81e-07!4;UBERON:0009113!4.81e-07!4;UBERON:0003295!4.81e-07!4;UBERON:0005562!4.81e-07!4;UBERON:0004177!5.89e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,0.410502947249729,0.314843125254717,0,0,0,0,0,0,0,0.710846162437108,0,0,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13477044938228,1.24564449799115,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.411202997999018,0.334372990781356,0.32592226663359,0,0,1.33692548262208,1.17842362989935,0,1.35401931882508,3.84273959177025,3.25148368899696,4.1109476150919,1.38175008892924,1.73881851441031,0.889719378972363,0.535081656179426,0,1.24640276967323,0.383220493601921,0,4.30133476433155,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.248298857183432,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,3.20568492303233 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|short_description=p@chr1:160605219..160605230,- | |short_description=p@chr1:160605219..160605230,- | ||
}} | }} |
Latest revision as of 23:22, 27 July 2015
Short description: | p@chr1:160605219..160605230, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160605219..160605230, - |
Coexpression cluster: | C1715_CD4_xeroderma_B_splenic_thymus_b_non |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.73e-13 | 1 |
plasma cell | 9.73e-13 | 1 |
plasmablast | 9.73e-13 | 1 |
regulatory T cell | 4.69e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.69e-07 | 2 |
naive regulatory T cell | 4.69e-07 | 2 |
mature B cell | 5.28e-07 | 2 |
pre-B-II cell | 5.28e-07 | 2 |
transitional stage B cell | 5.28e-07 | 2 |
small pre-B-II cell | 5.28e-07 | 2 |
immature B cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.62e-13 | 1 |
monogenic disease | 2.62e-13 | 1 |
xeroderma pigmentosum | 2.62e-13 | 1 |