FFCP PHASE1:Hg19::chr1:182352898..182352944,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:182352898..182352944,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_at_chr1:182352898..182352944,- | |description=CAGE_peak_at_chr1:182352898..182352944,- | ||
|id=chr1:182352898..182352944,- | |id=chr1:182352898..182352944,- | ||
|ontology_enrichment_celltype=CL:0000766!5.90e-13!76;CL:0000763!9.65e-12!112;CL:0000049!9.65e-12!112;CL:0002057!5.25e-11!42;CL:0000839!1.69e-10!70;CL:0002009!6.46e-10!65;CL:0002194!6.95e-10!63;CL:0000576!6.95e-10!63;CL:0000040!6.95e-10!63;CL:0000559!6.95e-10!63;CL:0000557!1.60e-09!71;CL:0000860!6.24e-09!45 | |ontology_enrichment_celltype=CL:0000766!5.90e-13!76;CL:0000763!9.65e-12!112;CL:0000049!9.65e-12!112;CL:0002057!5.25e-11!42;CL:0000839!1.69e-10!70;CL:0002009!6.46e-10!65;CL:0002194!6.95e-10!63;CL:0000576!6.95e-10!63;CL:0000040!6.95e-10!63;CL:0000559!6.95e-10!63;CL:0000557!1.60e-09!71;CL:0000860!6.24e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.87e-11;39!CL:0000234;3.87e-11;39!CL:0000860;3.81e-09;33!CL:0002057;3.81e-09;33!CL:0000576;9.28e-09;48!CL:0000766;2.16e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.72e-17,72;CL:0000473,1.75e-16,48;CL:0000234,1.75e-16,48;CL:0002194,1.02e-14,59;CL:0000576,1.02e-14,59;CL:0000040,1.02e-14,59;CL:0000559,1.02e-14,59;CL:0002009,1.10e-14,61;CL:0000763,1.91e-14,108;CL:0000049,1.91e-14,108;CL:0000839,2.99e-14,66;CL:0000557,4.52e-13,67;CL:0000860,1.84e-12,42;CL:0002057,1.84e-12,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-24!115;UBERON:0001049!2.25e-12!57;UBERON:0005068!2.25e-12!57;UBERON:0006241!2.25e-12!57;UBERON:0007135!2.25e-12!57;UBERON:0005743!7.30e-10!86;UBERON:0003075!7.79e-10!86;UBERON:0007284!7.79e-10!86;UBERON:0001017!1.01e-09!82;UBERON:0002616!1.67e-09!59;UBERON:0002780!2.86e-09!41;UBERON:0001890!2.86e-09!41;UBERON:0006240!2.86e-09!41;UBERON:0002020!3.11e-09!34;UBERON:0003528!3.11e-09!34;UBERON:0002346!3.98e-09!90;UBERON:0001893!1.09e-08!34;UBERON:0003080!1.27e-08!42;UBERON:0002791!1.85e-08!33;UBERON:0002390!2.47e-08!102;UBERON:0003061!2.47e-08!102;UBERON:0001869!4.87e-08!32;UBERON:0000955!6.27e-08!69;UBERON:0006238!6.27e-08!69;UBERON:0000956!1.73e-07!25;UBERON:0000203!1.73e-07!25;UBERON:0000073!2.16e-07!94;UBERON:0001016!2.16e-07!94;UBERON:0000062!2.25e-07!511;UBERON:0000153!2.93e-07!129;UBERON:0007811!2.93e-07!129;UBERON:0002619!2.95e-07!22;UBERON:0000033!3.13e-07!123;UBERON:0002371!3.63e-07!80;UBERON:0004765!6.19e-07!101;UBERON:0001434!6.19e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.66e-10;34!UBERON:0003528;6.00e-10;34!UBERON:0002020;6.00e-10;34!UBERON:0002791;9.34e-10;32!UBERON:0000073;1.00e-09;53!UBERON:0002616;1.00e-09;53!UBERON:0002619;1.80e-09;22!UBERON:0001869;2.03e-09;32!UBERON:0002780;4.15e-09;41!UBERON:0001890;4.15e-09;41!UBERON:0000956;1.28e-08;25!UBERON:0000203;1.28e-08;25!UBERON:0001950;4.51e-08;20!UBERON:0007023;1.55e-07;114!UBERON:0001017;9.87e-07;75 | |||
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| ||
|short_description=p@chr1:182352898..182352944,- | |short_description=p@chr1:182352898..182352944,- | ||
}} | }} |
Latest revision as of 01:03, 28 July 2015
Short description: | p@chr1:182352898..182352944, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:182352898..182352944, - |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.72e-17 | 72 |
defensive cell | 1.75e-16 | 48 |
phagocyte | 1.75e-16 | 48 |
monopoietic cell | 1.02e-14 | 59 |
monocyte | 1.02e-14 | 59 |
monoblast | 1.02e-14 | 59 |
promonocyte | 1.02e-14 | 59 |
macrophage dendritic cell progenitor | 1.10e-14 | 61 |
myeloid cell | 1.91e-14 | 108 |
common myeloid progenitor | 1.91e-14 | 108 |
myeloid lineage restricted progenitor cell | 2.99e-14 | 66 |
granulocyte monocyte progenitor cell | 4.52e-13 | 67 |
classical monocyte | 1.84e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.84e-12 | 42 |