FFCP PHASE1:Hg19::chr1:203148373..203148396,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_CU678996_5end | |||
|cluster_id=chr1:203148373..203148396,+ | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_3_at_CU678996_5end | |||
|id=chr1:203148373..203148396,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.06e-11!9;CL:0000447!1.06e-11!9;CL:0000135!5.61e-10!3;CL:0000386!5.61e-10!3;CL:0000388!5.61e-10!3;CL:0000667!3.04e-08!6;CL:0000058!3.04e-08!6;CL:0000138!3.04e-08!6;CL:0000499!1.97e-07!27;CL:0000235!3.20e-07!10;CL:0000327!3.27e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.17e-24;3!CL:0000388;2.17e-24;3!CL:0000153;4.77e-22;9!CL:0000447;4.77e-22;9!CL:0000235;5.45e-21;6!CL:0000499;4.33e-17;28!CL:0000327;3.58e-13;15!CL:0000138;1.57e-12;6!CL:0002540;3.03e-12;6!CL:0000214;1.09e-11;3!CL:0002092;1.53e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.26e-24,3;CL:0000388,2.26e-24,3;CL:0000153,4.99e-22,9;CL:0000447,4.99e-22,9;CL:0000235,5.46e-21,6;CL:0000499,4.48e-17,28;CL:0000327,3.67e-13,15;CL:0000058,1.63e-12,6;CL:0000138,1.63e-12,6;CL:0002540,2.81e-12,6;CL:0000214,1.09e-11,3;CL:0002092,1.47e-07,10;CL:0000151,2.24e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.09e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;4.03e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,4.19e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!5.61e-10!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.17e-24;3!UBERON:0000043;2.17e-24;3!UBERON:0007845;2.17e-24;3!UBERON:0006915;1.09e-11;3!UBERON:0007616;1.09e-11;3!UBERON:0002217;1.09e-11;3!UBERON:0002018;1.09e-11;3!UBERON:0001282;5.53e-09;1!UBERON:0009842;5.53e-09;1!UBERON:0003704;5.53e-09;1!UBERON:0001171;5.53e-09;1!UBERON:0001172;5.53e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.26e-24,3;UBERON:0000043,2.26e-24,3;UBERON:0007845,2.26e-24,3;UBERON:0006915,1.09e-11,3;UBERON:0007616,1.09e-11,3;UBERON:0002217,1.09e-11,3;UBERON:0002018,1.09e-11,3;UBERON:0001282,5.31e-09,1;UBERON:0009842,5.31e-09,1;UBERON:0003704,5.31e-09,1;UBERON:0001171,5.31e-09,1;UBERON:0001172,5.31e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42158728576849,0.50133791063589,12.0222610737484,0,4.37971383272372,0,0,0,0,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,4.68008530278475,4.60756603095058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0441802826225,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,1.33479313369527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39278317278703,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,1.44475294950759,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,1.31897010310274,0,0,0.26446520348538,0,0,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,1.66441758450784,3.03044808440143,20.3770000419586,1.77962244319307,0,0.302461847526478,0,0,0,0.899606224327209,0,0,0,0.521745061811734,0.601030435988874,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,1.53498834705095,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,3.60124819818579,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,0.354996002191696,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.415860508669,111.846502128803,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CU678996 | |||
}} | }} |
Latest revision as of 02:23, 28 July 2015
Short description: | p3@CU678996 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU678996_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -177bp_to_CU678996_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.26e-24 | 3 |
tendon cell | 2.26e-24 | 3 |
GAG secreting cell | 4.99e-22 | 9 |
carbohydrate secreting cell | 4.99e-22 | 9 |
macrophage | 5.46e-21 | 6 |
stromal cell | 4.48e-17 | 28 |
extracellular matrix secreting cell | 3.67e-13 | 15 |
chondroblast | 1.63e-12 | 6 |
chondrocyte | 1.63e-12 | 6 |
mesenchymal stem cell of the bone marrow | 2.81e-12 | 6 |
synovial cell | 1.09e-11 | 3 |
bone marrow cell | 1.47e-07 | 10 |
secretory cell | 2.24e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.26e-24 | 3 |
tendon | 2.26e-24 | 3 |
regular connective tissue | 2.26e-24 | 3 |
stratified squamous epithelium | 1.09e-11 | 3 |
layer of synovial tissue | 1.09e-11 | 3 |
synovial joint | 1.09e-11 | 3 |
synovial membrane of synovial joint | 1.09e-11 | 3 |
intralobular bile duct | 5.31e-09 | 1 |
acinus | 5.31e-09 | 1 |
intrahepatic bile duct | 5.31e-09 | 1 |
portal lobule | 5.31e-09 | 1 |
hepatic acinus | 5.31e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.19e-09 | 1 |