FFCP PHASE1:Hg19::chr1:234978750..234978761,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:234978750..234978761,- | |||
|coexpression_cluster_id=C2573 | |||
|description=CAGE_peak_at_chr1:234978750..234978761,- | |description=CAGE_peak_at_chr1:234978750..234978761,- | ||
|id=chr1:234978750..234978761,- | |id=chr1:234978750..234978761,- | ||
|ontology_enrichment_celltype=CL:0000738!9.10e-52!140;CL:0000988!4.10e-44!182;CL:0000766!1.98e-41!76;CL:0002031!5.90e-41!124;CL:0002087!8.22e-41!119;CL:0000037!2.21e-40!172;CL:0000566!2.21e-40!172;CL:0000557!1.54e-38!71;CL:0002057!2.08e-36!42;CL:0000839!3.11e-36!70;CL:0002032!2.95e-34!165;CL:0000837!2.95e-34!165;CL:0002009!8.51e-34!65;CL:0000860!1.26e-33!45;CL:0002194!3.82e-32!63;CL:0000576!3.82e-32!63;CL:0000040!3.82e-32!63;CL:0000559!3.82e-32!63;CL:0000763!8.08e-28!112;CL:0000049!8.08e-28!112;CL:0000080!2.04e-24!6;CL:0000840!1.00e-15!5;CL:0001029!1.00e-15!5;CL:0000134!2.60e-14!358;CL:0002320!7.61e-14!365;CL:0000842!1.53e-12!3;CL:0000219!3.33e-12!390;CL:0000451!6.05e-12!10;CL:0002393!2.05e-11!9;CL:0002397!2.05e-11!9;CL:0000034!2.12e-10!444;CL:0000990!2.13e-10!8;CL:0000048!3.07e-10!430;CL:0000723!5.85e-10!436;CL:0000224!1.62e-09!4;CL:0002274!2.92e-07!5;CL:0000457!2.92e-07!5;CL:0002191!2.92e-07!5;CL:0000097!2.92e-07!5;CL:0000831!2.92e-07!5;CL:0002028!2.92e-07!5;CL:0000838!8.79e-07!52 | |ontology_enrichment_celltype=CL:0000738!9.10e-52!140;CL:0000988!4.10e-44!182;CL:0000766!1.98e-41!76;CL:0002031!5.90e-41!124;CL:0002087!8.22e-41!119;CL:0000037!2.21e-40!172;CL:0000566!2.21e-40!172;CL:0000557!1.54e-38!71;CL:0002057!2.08e-36!42;CL:0000839!3.11e-36!70;CL:0002032!2.95e-34!165;CL:0000837!2.95e-34!165;CL:0002009!8.51e-34!65;CL:0000860!1.26e-33!45;CL:0002194!3.82e-32!63;CL:0000576!3.82e-32!63;CL:0000040!3.82e-32!63;CL:0000559!3.82e-32!63;CL:0000763!8.08e-28!112;CL:0000049!8.08e-28!112;CL:0000080!2.04e-24!6;CL:0000840!1.00e-15!5;CL:0001029!1.00e-15!5;CL:0000134!2.60e-14!358;CL:0002320!7.61e-14!365;CL:0000842!1.53e-12!3;CL:0000219!3.33e-12!390;CL:0000451!6.05e-12!10;CL:0002393!2.05e-11!9;CL:0002397!2.05e-11!9;CL:0000034!2.12e-10!444;CL:0000990!2.13e-10!8;CL:0000048!3.07e-10!430;CL:0000723!5.85e-10!436;CL:0000224!1.62e-09!4;CL:0002274!2.92e-07!5;CL:0000457!2.92e-07!5;CL:0002191!2.92e-07!5;CL:0000097!2.92e-07!5;CL:0000831!2.92e-07!5;CL:0002028!2.92e-07!5;CL:0000838!8.79e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.04e-44;6!CL:0002397;2.04e-44;6!CL:0000576;8.11e-11;48!CL:0000766;1.20e-07;69!CL:0000081;5.64e-07;11!CL:0000775;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,6.83e-30,9;CL:0002397,6.83e-30,9;CL:0000860,6.57e-19,42;CL:0002057,6.57e-19,42;CL:0000473,1.66e-16,48;CL:0000234,1.66e-16,48;CL:0000766,6.05e-14,72;CL:0002194,3.90e-13,59;CL:0000576,3.90e-13,59;CL:0000040,3.90e-13,59;CL:0000559,3.90e-13,59;CL:0002009,1.06e-12,61;CL:0000839,1.01e-11,66;CL:0000557,1.52e-11,67;CL:0000988,2.07e-10,177;CL:0000763,3.80e-09,108;CL:0000049,3.80e-09,108;CL:0000738,3.83e-07,136;CL:0000081,5.47e-07,11;CL:0000775,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-38!102;UBERON:0003061!1.02e-38!102;UBERON:0002193!1.51e-34!112;UBERON:0002371!1.86e-33!80;UBERON:0001474!1.18e-30!86;UBERON:0004765!4.25e-25!101;UBERON:0001434!4.25e-25!101;UBERON:0002405!3.26e-21!115;UBERON:0003081!5.00e-14!216;UBERON:0002384!3.29e-13!375;UBERON:0002204!1.67e-12!167;UBERON:0000178!2.37e-09!15;UBERON:0000179!2.37e-09!15;UBERON:0000463!2.37e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.01e-15;10!UBERON:0000178;1.08e-10;15!UBERON:0000179;1.08e-10;15!UBERON:0000463;1.08e-10;15!UBERON:0000478;6.88e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.59e-16,98;UBERON:0003061,5.59e-16,98;UBERON:0002331,1.06e-15,10;UBERON:0000358,1.06e-15,10;UBERON:0000307,1.06e-15,10;UBERON:0000091,1.06e-15,10;UBERON:0000087,1.06e-15,10;UBERON:0007010,1.06e-15,10;UBERON:0007806,1.06e-15,10;UBERON:0008780,1.06e-15,10;UBERON:0005728,1.06e-15,10;UBERON:0002193,1.92e-14,108;UBERON:0000178,1.11e-10,15;UBERON:0000179,1.11e-10,15;UBERON:0000463,1.11e-10,15;UBERON:0002371,3.79e-10,76;UBERON:0001474,2.21e-09,82;UBERON:0004765,1.61e-08,90;UBERON:0002405,3.12e-08,93;UBERON:0001434,1.25e-07,100;UBERON:0003081,2.64e-07,203;UBERON:0000478,7.03e-07,24 | |||
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|short_description=p@chr1:234978750..234978761,- | |short_description=p@chr1:234978750..234978761,- | ||
}} | }} |
Latest revision as of 05:15, 28 July 2015
Short description: | p@chr1:234978750..234978761, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:234978750..234978761, - |
Coexpression cluster: | C2573_cord_CD14_migratory_CD19_splenic_CD34_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 6.83e-30 | 9 |
CD14-positive, CD16-positive monocyte | 6.83e-30 | 9 |
classical monocyte | 6.57e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.57e-19 | 42 |
defensive cell | 1.66e-16 | 48 |
phagocyte | 1.66e-16 | 48 |
myeloid leukocyte | 6.05e-14 | 72 |
monopoietic cell | 3.90e-13 | 59 |
monocyte | 3.90e-13 | 59 |
monoblast | 3.90e-13 | 59 |
promonocyte | 3.90e-13 | 59 |
macrophage dendritic cell progenitor | 1.06e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.01e-11 | 66 |
granulocyte monocyte progenitor cell | 1.52e-11 | 67 |
hematopoietic cell | 2.07e-10 | 177 |
myeloid cell | 3.80e-09 | 108 |
common myeloid progenitor | 3.80e-09 | 108 |
leukocyte | 3.83e-07 | 136 |
blood cell | 5.47e-07 | 11 |
neutrophil | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.59e-16 | 98 |
blood island | 5.59e-16 | 98 |
umbilical cord | 1.06e-15 | 10 |
blastocyst | 1.06e-15 | 10 |
blastula | 1.06e-15 | 10 |
bilaminar disc | 1.06e-15 | 10 |
inner cell mass | 1.06e-15 | 10 |
cleaving embryo | 1.06e-15 | 10 |
connecting stalk | 1.06e-15 | 10 |
inner cell mass derived epiblast | 1.06e-15 | 10 |
extraembryonic mesoderm | 1.06e-15 | 10 |
hemolymphoid system | 1.92e-14 | 108 |
blood | 1.11e-10 | 15 |
haemolymphatic fluid | 1.11e-10 | 15 |
organism substance | 1.11e-10 | 15 |
bone marrow | 3.79e-10 | 76 |
bone element | 2.21e-09 | 82 |
skeletal element | 1.61e-08 | 90 |
immune system | 3.12e-08 | 93 |
skeletal system | 1.25e-07 | 100 |
lateral plate mesoderm | 2.64e-07 | 203 |
extraembryonic structure | 7.03e-07 | 24 |