FFCP PHASE1:Hg19::chr1:47697067..47697080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:47697067..47697080,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr1:47697067..47697080,+ | |description=CAGE_peak_at_chr1:47697067..47697080,+ | ||
|id=chr1:47697067..47697080,+ | |id=chr1:47697067..47697080,+ | ||
|ontology_enrichment_celltype=CL:0000115!8.91e-31!35;CL:0002139!1.33e-28!24;CL:0000071!1.38e-24!18;CL:0002546!1.38e-24!18;CL:0002078!5.51e-23!44;CL:0000213!3.88e-16!57;CL:0000215!3.88e-16!57;CL:1000413!7.33e-15!9;CL:0002274!2.70e-12!5;CL:0000457!2.70e-12!5;CL:0002191!2.70e-12!5;CL:0000097!2.70e-12!5;CL:0000831!2.70e-12!5;CL:0002028!2.70e-12!5;CL:0002544!3.54e-09!6;CL:0002144!9.54e-08!3;CL:0002618!4.89e-07!3 | |ontology_enrichment_celltype=CL:0000115!8.91e-31!35;CL:0002139!1.33e-28!24;CL:0000071!1.38e-24!18;CL:0002546!1.38e-24!18;CL:0002078!5.51e-23!44;CL:0000213!3.88e-16!57;CL:0000215!3.88e-16!57;CL:1000413!7.33e-15!9;CL:0002274!2.70e-12!5;CL:0000457!2.70e-12!5;CL:0002191!2.70e-12!5;CL:0000097!2.70e-12!5;CL:0000831!2.70e-12!5;CL:0002028!2.70e-12!5;CL:0002544!3.54e-09!6;CL:0002144!9.54e-08!3;CL:0002618!4.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.51e-27;5!CL:0000115;6.47e-23;36!CL:0002139;1.79e-16;24!CL:0000163;5.69e-15;9!CL:0000071;1.04e-13;18!CL:0000764;9.66e-13;2!CL:0000558;9.66e-13;2!CL:0002262;2.68e-12;2!CL:1000398;2.68e-12;2!CL:0002078;2.96e-12;45!CL:0002188;1.42e-10;5!CL:1000413;1.07e-09;9!CL:0000213;1.56e-08;58!CL:0000215;1.56e-08;58!CL:0002144;3.60e-08;3!CL:1000746;1.12e-07;7!CL:1000612;1.12e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.05e-27,5;CL:0002028,2.05e-27,5;CL:0000115,3.80e-26,36;CL:0002078,2.46e-20,45;CL:0002139,3.02e-16,24;CL:0000163,3.71e-15,9;CL:0000213,3.96e-15,58;CL:0000215,3.96e-15,58;CL:0000071,1.32e-13,18;CL:0002546,1.32e-13,18;CL:0000764,9.68e-13,2;CL:0000765,9.68e-13,2;CL:0000050,9.68e-13,2;CL:0000038,9.68e-13,2;CL:0000558,9.68e-13,2;CL:0000547,9.68e-13,2;CL:0000549,9.68e-13,2;CL:0000550,9.68e-13,2;CL:0000552,9.68e-13,2;CL:0002262,2.53e-12,2;CL:1000398,2.53e-12,2;CL:0002188,1.85e-10,5;CL:1000413,1.50e-09,9;CL:0000763,1.97e-09,108;CL:0000049,1.97e-09,108;CL:0002144,2.74e-08,3;CL:1000746,1.34e-07,7;CL:1000612,1.34e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.04e-13;18 | |||
|ontology_enrichment_disease=DOID:8692!3.55e-11!31;DOID:1036!2.27e-10!8;DOID:1240!2.10e-09!39 | |ontology_enrichment_disease=DOID:8692!3.55e-11!31;DOID:1036!2.27e-10!8;DOID:1240!2.10e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.06e-23;8!DOID:8692;5.86e-12;31!DOID:1240;4.83e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,8.35e-24,8;DOID:8692,1.18e-12,31;DOID:1240,9.42e-10,39;DOID:2531,4.10e-07,51;DOID:0060083,4.10e-07,51;DOID:8552,9.79e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.38e-24!18;UBERON:0004638!1.38e-24!18;UBERON:0004852!1.38e-24!18;UBERON:0000487!2.40e-19!22;UBERON:0006914!1.58e-16!25;UBERON:0003915!7.33e-15!9;UBERON:0004700!7.33e-15!9;UBERON:0001917!7.33e-15!9;UBERON:0000178!1.27e-13!15;UBERON:0000179!1.27e-13!15;UBERON:0000463!1.27e-13!15;UBERON:0004535!6.83e-13!110;UBERON:0001009!2.59e-12!113;UBERON:0000055!1.15e-09!69;UBERON:0007023!6.30e-09!115;UBERON:0001915!9.54e-08!3;UBERON:0001982!9.54e-08!3;UBERON:0002049!9.57e-08!79;UBERON:0007798!9.57e-08!79;UBERON:0001981!1.75e-07!60;UBERON:0007500!1.75e-07!60;UBERON:0004537!1.75e-07!60;UBERON:0006965!1.75e-07!60;UBERON:0003081!1.78e-07!216;UBERON:0004872!8.21e-07!84;UBERON:0000025!8.87e-07!194 | |ontology_enrichment_uberon=UBERON:0001986!1.38e-24!18;UBERON:0004638!1.38e-24!18;UBERON:0004852!1.38e-24!18;UBERON:0000487!2.40e-19!22;UBERON:0006914!1.58e-16!25;UBERON:0003915!7.33e-15!9;UBERON:0004700!7.33e-15!9;UBERON:0001917!7.33e-15!9;UBERON:0000178!1.27e-13!15;UBERON:0000179!1.27e-13!15;UBERON:0000463!1.27e-13!15;UBERON:0004535!6.83e-13!110;UBERON:0001009!2.59e-12!113;UBERON:0000055!1.15e-09!69;UBERON:0007023!6.30e-09!115;UBERON:0001915!9.54e-08!3;UBERON:0001982!9.54e-08!3;UBERON:0002049!9.57e-08!79;UBERON:0007798!9.57e-08!79;UBERON:0001981!1.75e-07!60;UBERON:0007500!1.75e-07!60;UBERON:0004537!1.75e-07!60;UBERON:0006965!1.75e-07!60;UBERON:0003081!1.78e-07!216;UBERON:0004872!8.21e-07!84;UBERON:0000025!8.87e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.04e-13;18!UBERON:0001986;1.04e-13;18!UBERON:0004852;1.04e-13;18!UBERON:0000178;4.39e-13;15!UBERON:0000179;4.39e-13;15!UBERON:0000463;4.39e-13;15!UBERON:0001281;2.68e-12;2!UBERON:0003497;2.68e-12;2!UBERON:0003909;2.68e-12;2!UBERON:0003835;2.68e-12;2!UBERON:0000487;4.65e-11;22!UBERON:0003915;1.07e-09;9!UBERON:0004700;1.07e-09;9!UBERON:0001917;1.07e-09;9!UBERON:0006914;1.26e-09;25!UBERON:0000353;4.05e-09;15!UBERON:0001280;1.76e-08;3!UBERON:0004647;1.76e-08;3!UBERON:0010523;3.60e-08;3!UBERON:0001915;3.60e-08;3!UBERON:0001982;3.60e-08;3!UBERON:0000074;1.12e-07;7!UBERON:0001229;1.12e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.32e-13,18;UBERON:0001986,1.32e-13,18;UBERON:0004852,1.32e-13,18;UBERON:0000178,4.04e-13,15;UBERON:0000179,4.04e-13,15;UBERON:0000463,4.04e-13,15;UBERON:0001281,2.53e-12,2;UBERON:0003497,2.53e-12,2;UBERON:0003909,2.53e-12,2;UBERON:0003835,2.53e-12,2;UBERON:0000487,5.64e-11,22;UBERON:0004535,1.01e-10,109;UBERON:0001009,2.45e-10,112;UBERON:0006914,1.49e-09,25;UBERON:0003915,1.50e-09,9;UBERON:0004700,1.50e-09,9;UBERON:0001917,1.50e-09,9;UBERON:0003081,3.06e-09,203;UBERON:0000353,4.57e-09,15;UBERON:0001280,1.70e-08,3;UBERON:0004647,1.70e-08,3;UBERON:0005171,1.70e-08,3;UBERON:0010523,2.74e-08,3;UBERON:0001915,2.74e-08,3;UBERON:0001982,2.74e-08,3;UBERON:0010532,1.34e-07,7;UBERON:0000074,1.34e-07,7;UBERON:0001229,1.34e-07,7;UBERON:0001230,1.34e-07,7;UBERON:0003220,1.34e-07,7;UBERON:0005749,1.34e-07,7;UBERON:0004199,1.34e-07,7;UBERON:0004209,1.34e-07,7;UBERON:0004198,1.34e-07,7;UBERON:0000055,2.09e-07,68;UBERON:0000058,4.24e-07,19 | |||
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|short_description=p@chr1:47697067..47697080,+ | |short_description=p@chr1:47697067..47697080,+ | ||
}} | }} |
Latest revision as of 08:52, 28 July 2015
Short description: | p@chr1:47697067..47697080, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:47697067..47697080, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.05e-27 | 5 |
basophil mast progenitor cell | 2.05e-27 | 5 |
endothelial cell | 3.80e-26 | 36 |
meso-epithelial cell | 2.46e-20 | 45 |
endothelial cell of vascular tree | 3.02e-16 | 24 |
endocrine cell | 3.71e-15 | 9 |
lining cell | 3.96e-15 | 58 |
barrier cell | 3.96e-15 | 58 |
blood vessel endothelial cell | 1.32e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.32e-13 | 18 |
erythroid lineage cell | 9.68e-13 | 2 |
erythroblast | 9.68e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 9.68e-13 | 2 |
erythroid progenitor cell | 9.68e-13 | 2 |
reticulocyte | 9.68e-13 | 2 |
proerythroblast | 9.68e-13 | 2 |
basophilic erythroblast | 9.68e-13 | 2 |
polychromatophilic erythroblast | 9.68e-13 | 2 |
orthochromatic erythroblast | 9.68e-13 | 2 |
endothelial cell of sinusoid | 2.53e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.53e-12 | 2 |
glomerular endothelial cell | 1.85e-10 | 5 |
endothelial cell of artery | 1.50e-09 | 9 |
myeloid cell | 1.97e-09 | 108 |
common myeloid progenitor | 1.97e-09 | 108 |
capillary endothelial cell | 2.74e-08 | 3 |
glomerular cell | 1.34e-07 | 7 |
kidney corpuscule cell | 1.34e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.32e-13 | 18 |
endothelium | 1.32e-13 | 18 |
cardiovascular system endothelium | 1.32e-13 | 18 |
blood | 4.04e-13 | 15 |
haemolymphatic fluid | 4.04e-13 | 15 |
organism substance | 4.04e-13 | 15 |
hepatic sinusoid | 2.53e-12 | 2 |
abdomen blood vessel | 2.53e-12 | 2 |
sinusoid | 2.53e-12 | 2 |
abdominal segment blood vessel | 2.53e-12 | 2 |
simple squamous epithelium | 5.64e-11 | 22 |
cardiovascular system | 1.01e-10 | 109 |
circulatory system | 2.45e-10 | 112 |
squamous epithelium | 1.49e-09 | 25 |
endothelial tube | 1.50e-09 | 9 |
arterial system endothelium | 1.50e-09 | 9 |
endothelium of artery | 1.50e-09 | 9 |
lateral plate mesoderm | 3.06e-09 | 203 |
parenchyma | 4.57e-09 | 15 |
liver parenchyma | 1.70e-08 | 3 |
liver lobule | 1.70e-08 | 3 |
hepatic duct | 1.70e-08 | 3 |
microcirculatory vessel | 2.74e-08 | 3 |
endothelium of capillary | 2.74e-08 | 3 |
capillary | 2.74e-08 | 3 |
primitive nephron | 1.34e-07 | 7 |
renal glomerulus | 1.34e-07 | 7 |
renal corpuscle | 1.34e-07 | 7 |
glomerular capsule | 1.34e-07 | 7 |
metanephric mesenchyme | 1.34e-07 | 7 |
glomerular tuft | 1.34e-07 | 7 |
S-shaped body | 1.34e-07 | 7 |
renal vesicle | 1.34e-07 | 7 |
comma-shaped body | 1.34e-07 | 7 |
vessel | 2.09e-07 | 68 |
duct | 4.24e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 8.35e-24 | 8 |
myeloid leukemia | 1.18e-12 | 31 |
leukemia | 9.42e-10 | 39 |
hematologic cancer | 4.10e-07 | 51 |
immune system cancer | 4.10e-07 | 51 |
chronic myeloid leukemia | 9.79e-07 | 1 |