FFCP PHASE1:Hg19::chr20:3999149..3999160,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:3999149..3999160,- | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_at_chr20:3999149..3999160,- | |||
|id=chr20:3999149..3999160,- | |||
|ontology_enrichment_celltype=CL:0000188!6.99e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.86e-29;7!CL:0000586;4.86e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.86e-29,7;CL:0000586,4.86e-29,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.96e-07!239;DOID:305!8.79e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.96e-10;22!DOID:2994;4.96e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.96e-10,22;DOID:2994,4.96e-10,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.82e-14;4!UBERON:0004907;2.66e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.82e-14,4;UBERON:0004907,2.66e-11,5 | |||
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| ||
|short_description=p@chr20:3999149..3999160,- | |||
}} | }} |
Latest revision as of 14:03, 28 July 2015
Short description: | p@chr20:3999149..3999160, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:3999149..3999160, - |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.86e-29 | 7 |
germ cell | 4.86e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.82e-14 | 4 |
lower digestive tract | 2.66e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.96e-10 | 22 |
germ cell cancer | 4.96e-10 | 22 |