FFCP PHASE1:Hg19::chr20:48130918..48130935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48130918..48130935,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48130918..48130935,- | |description=CAGE_peak_at_chr20:48130918..48130935,- | ||
|id=chr20:48130918..48130935,- | |id=chr20:48130918..48130935,- | ||
|ontology_enrichment_celltype=CL:0000055!7.86e-13!180;CL:0000057!5.06e-12!75;CL:0000077!3.89e-08!19;CL:0000359!5.84e-08!32;CL:0002334!7.63e-07!12;CL:0002595!7.88e-07!5 | |ontology_enrichment_celltype=CL:0000055!7.86e-13!180;CL:0000057!5.06e-12!75;CL:0000077!3.89e-08!19;CL:0000359!5.84e-08!32;CL:0002334!7.63e-07!12;CL:0002595!7.88e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.12e-11;3!CL:0000388;1.12e-11;3!CL:1000306;3.54e-09;4!CL:0002547;3.54e-09;4!CL:0002596;2.24e-08;2!CL:0002334;1.52e-07;12!CL:0002595;1.89e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,9.06e-12,3;CL:0000388,9.06e-12,3;CL:0000057,8.85e-10,76;CL:1000306,2.88e-09,4;CL:0002547,2.88e-09,4;CL:0002596,1.39e-08,2;CL:0002334,1.26e-07,12;CL:0002595,2.26e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.31e-13!84;UBERON:0007100!1.12e-11!27;UBERON:0000948!4.26e-11!24;UBERON:0005498!4.26e-11!24;UBERON:0004140!4.26e-11!24;UBERON:0009881!4.26e-11!24;UBERON:0004141!4.26e-11!24;UBERON:0003084!4.26e-11!24;UBERON:0007005!4.26e-11!24;UBERON:0004139!4.26e-11!24;UBERON:0004291!4.26e-11!24;UBERON:0001637!6.44e-10!42;UBERON:0003509!6.44e-10!42;UBERON:0004572!6.44e-10!42;UBERON:0004573!2.61e-09!33;UBERON:0004571!2.61e-09!33;UBERON:0003914!5.01e-09!118;UBERON:0001009!5.49e-09!113;UBERON:0001981!6.60e-09!60;UBERON:0007500!6.60e-09!60;UBERON:0004537!6.60e-09!60;UBERON:0006965!6.60e-09!60;UBERON:0004535!2.02e-08!110;UBERON:0002049!5.46e-07!79;UBERON:0007798!5.46e-07!79;UBERON:0003834!7.88e-07!5;UBERON:0001533!7.88e-07!5 | |ontology_enrichment_uberon=UBERON:0004872!1.31e-13!84;UBERON:0007100!1.12e-11!27;UBERON:0000948!4.26e-11!24;UBERON:0005498!4.26e-11!24;UBERON:0004140!4.26e-11!24;UBERON:0009881!4.26e-11!24;UBERON:0004141!4.26e-11!24;UBERON:0003084!4.26e-11!24;UBERON:0007005!4.26e-11!24;UBERON:0004139!4.26e-11!24;UBERON:0004291!4.26e-11!24;UBERON:0001637!6.44e-10!42;UBERON:0003509!6.44e-10!42;UBERON:0004572!6.44e-10!42;UBERON:0004573!2.61e-09!33;UBERON:0004571!2.61e-09!33;UBERON:0003914!5.01e-09!118;UBERON:0001009!5.49e-09!113;UBERON:0001981!6.60e-09!60;UBERON:0007500!6.60e-09!60;UBERON:0004537!6.60e-09!60;UBERON:0006965!6.60e-09!60;UBERON:0004535!2.02e-08!110;UBERON:0002049!5.46e-07!79;UBERON:0007798!5.46e-07!79;UBERON:0003834!7.88e-07!5;UBERON:0001533!7.88e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.15e-14;9!UBERON:0000042;1.15e-14;9!UBERON:0007846;1.12e-11;3!UBERON:0000043;1.12e-11;3!UBERON:0007845;1.12e-11;3!UBERON:0003688;5.76e-10;6!UBERON:0002358;5.76e-10;6!UBERON:0003684;5.76e-10;6!UBERON:0001178;5.76e-10;6!UBERON:0004797;3.54e-09;4!UBERON:0000415;3.54e-09;4!UBERON:0007240;3.54e-09;4!UBERON:0005742;3.54e-09;4!UBERON:0005734;3.54e-09;4!UBERON:0004664;3.54e-09;4!UBERON:0004663;3.54e-09;4!UBERON:0000948;3.74e-09;22!UBERON:0005406;5.14e-09;2!UBERON:0004573;1.20e-08;33!UBERON:0004571;1.20e-08;33!UBERON:0005396;2.24e-08;2!UBERON:0000078;3.12e-08;2!UBERON:0002012;3.12e-08;2!UBERON:0008886;3.12e-08;2!UBERON:0007100;6.68e-08;25!UBERON:0001637;1.31e-07;42!UBERON:0003509;1.31e-07;42!UBERON:0004572;1.31e-07;42!UBERON:0003834;1.89e-07;5!UBERON:0001533;1.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.56e-14,83;UBERON:0000948,6.63e-13,24;UBERON:0005498,6.63e-13,24;UBERON:0004140,6.63e-13,24;UBERON:0009881,6.63e-13,24;UBERON:0004141,6.63e-13,24;UBERON:0003084,6.63e-13,24;UBERON:0007005,6.63e-13,24;UBERON:0004139,6.63e-13,24;UBERON:0004291,6.63e-13,24;UBERON:0007846,9.06e-12,3;UBERON:0000043,9.06e-12,3;UBERON:0007845,9.06e-12,3;UBERON:0007100,2.96e-11,27;UBERON:0004457,9.67e-11,12;UBERON:0000042,9.67e-11,12;UBERON:0001637,3.99e-10,42;UBERON:0003509,3.99e-10,42;UBERON:0004572,3.99e-10,42;UBERON:0003688,7.50e-10,6;UBERON:0002358,7.50e-10,6;UBERON:0003684,7.50e-10,6;UBERON:0001178,7.50e-10,6;UBERON:0003914,1.40e-09,117;UBERON:0004573,2.06e-09,33;UBERON:0004571,2.06e-09,33;UBERON:0000415,2.88e-09,4;UBERON:0007240,2.88e-09,4;UBERON:0005742,2.88e-09,4;UBERON:0005734,2.88e-09,4;UBERON:0004664,2.88e-09,4;UBERON:0004663,2.88e-09,4;UBERON:0005406,4.97e-09,2;UBERON:0004797,9.93e-09,7;UBERON:0005396,1.39e-08,2;UBERON:0004535,1.73e-08,109;UBERON:0001009,3.84e-08,112;UBERON:0000078,4.67e-08,2;UBERON:0007497,4.67e-08,2;UBERON:0003643,4.67e-08,2;UBERON:0003504,4.67e-08,2;UBERON:0003469,4.67e-08,2;UBERON:0003496,4.67e-08,2;UBERON:0002012,4.67e-08,2;UBERON:0008886,4.67e-08,2;UBERON:0007303,4.67e-08,2;UBERON:0002061,4.67e-08,2;UBERON:0005432,4.67e-08,2;UBERON:0004363,4.67e-08,2;UBERON:0007500,1.13e-07,59;UBERON:0001981,1.13e-07,59;UBERON:0004537,1.13e-07,59;UBERON:0006965,1.13e-07,59;UBERON:0003834,2.26e-07,5;UBERON:0001533,2.26e-07,5 | |||
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| ||
|short_description=p@chr20:48130918..48130935,- | |short_description=p@chr20:48130918..48130935,- | ||
}} | }} |
Latest revision as of 15:02, 28 July 2015
Short description: | p@chr20:48130918..48130935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48130918..48130935, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 9.06e-12 | 3 |
tendon cell | 9.06e-12 | 3 |
fibroblast | 8.85e-10 | 76 |
fibroblast of tunica adventitia of artery | 2.88e-09 | 4 |
fibroblast of the aortic adventitia | 2.88e-09 | 4 |
smooth muscle cell of the carotid artery | 1.39e-08 | 2 |
preadipocyte | 1.26e-07 | 12 |
smooth muscle cell of the subclavian artery | 2.26e-07 | 5 |