FFCP PHASE1:Hg19::chr20:48914162..48914165,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48914162..48914165,+ | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_at_chr20:48914162..48914165,+ | |description=CAGE_peak_at_chr20:48914162..48914165,+ | ||
|id=chr20:48914162..48914165,+ | |id=chr20:48914162..48914165,+ | ||
|ontology_enrichment_celltype=CL:0000235!1.63e-31!10;CL:0000244!1.65e-28!4;CL:0000731!1.65e-28!4;CL:0002009!9.16e-18!65;CL:0000557!3.46e-16!71;CL:0002194!7.71e-15!63;CL:0000576!7.71e-15!63;CL:0000040!7.71e-15!63;CL:0000559!7.71e-15!63;CL:0000839!2.81e-13!70;CL:0000766!3.66e-12!76;CL:0000763!7.12e-10!112;CL:0000049!7.12e-10!112;CL:0002031!8.34e-09!124;CL:0000738!1.16e-07!140;CL:0001014!1.45e-07!2;CL:0001016!1.45e-07!2;CL:0002087!2.00e-07!119 | |ontology_enrichment_celltype=CL:0000235!1.63e-31!10;CL:0000244!1.65e-28!4;CL:0000731!1.65e-28!4;CL:0002009!9.16e-18!65;CL:0000557!3.46e-16!71;CL:0002194!7.71e-15!63;CL:0000576!7.71e-15!63;CL:0000040!7.71e-15!63;CL:0000559!7.71e-15!63;CL:0000839!2.81e-13!70;CL:0000766!3.66e-12!76;CL:0000763!7.12e-10!112;CL:0000049!7.12e-10!112;CL:0002031!8.34e-09!124;CL:0000738!1.16e-07!140;CL:0001014!1.45e-07!2;CL:0001016!1.45e-07!2;CL:0002087!2.00e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000235;8.75e-88;6!CL:0000473;2.78e-19;39!CL:0000234;2.78e-19;39!CL:0000244;1.57e-09;4!CL:0000731;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.76e-88,6;CL:0000473,1.22e-17,48;CL:0000234,1.22e-17,48;CL:0002194,3.22e-14,59;CL:0000576,3.22e-14,59;CL:0000040,3.22e-14,59;CL:0000559,3.22e-14,59;CL:0002009,8.92e-14,61;CL:0000839,8.75e-13,66;CL:0000557,1.33e-12,67;CL:0000766,9.00e-12,72;CL:0000244,1.44e-09,4;CL:0000731,1.44e-09,4;CL:0000763,5.11e-08,108;CL:0000049,5.11e-08,108;CL:0002087,1.48e-07,115;CL:0002031,2.95e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!5.88e-23!5;UBERON:0005910!3.01e-19!6;UBERON:0002371!2.94e-14!80;UBERON:0002390!2.39e-13!102;UBERON:0003061!2.39e-13!102;UBERON:0001474!3.42e-13!86;UBERON:0002193!4.80e-12!112;UBERON:0004765!4.50e-11!101;UBERON:0001434!4.50e-11!101;UBERON:0002405!1.38e-09!115;UBERON:0000341!2.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.01e-08;5!UBERON:0005910;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.49e-11,76;UBERON:0001474,2.09e-10,82;UBERON:0004765,1.58e-09,90;UBERON:0002405,3.08e-09,93;UBERON:0002390,8.62e-09,98;UBERON:0003061,8.62e-09,98;UBERON:0001434,1.27e-08,100;UBERON:0002193,5.11e-08,108;UBERON:0000365,6.55e-08,5;UBERON:0005910,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,3.26988557035202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.51579964002488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.234004265139238,3.26988557035202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,3.51579964002488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:48914162..48914165,+ | |short_description=p@chr20:48914162..48914165,+ | ||
}} | }} |
Latest revision as of 15:12, 28 July 2015
Short description: | p@chr20:48914162..48914165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48914162..48914165, + |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.76e-88 | 6 |
defensive cell | 1.22e-17 | 48 |
phagocyte | 1.22e-17 | 48 |
monopoietic cell | 3.22e-14 | 59 |
monocyte | 3.22e-14 | 59 |
monoblast | 3.22e-14 | 59 |
promonocyte | 3.22e-14 | 59 |
macrophage dendritic cell progenitor | 8.92e-14 | 61 |
myeloid lineage restricted progenitor cell | 8.75e-13 | 66 |
granulocyte monocyte progenitor cell | 1.33e-12 | 67 |
myeloid leukocyte | 9.00e-12 | 72 |
transitional epithelial cell | 1.44e-09 | 4 |
urothelial cell | 1.44e-09 | 4 |
myeloid cell | 5.11e-08 | 108 |
common myeloid progenitor | 5.11e-08 | 108 |
nongranular leukocyte | 1.48e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.95e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.49e-11 | 76 |
bone element | 2.09e-10 | 82 |
skeletal element | 1.58e-09 | 90 |
immune system | 3.08e-09 | 93 |
hematopoietic system | 8.62e-09 | 98 |
blood island | 8.62e-09 | 98 |
skeletal system | 1.27e-08 | 100 |
hemolymphoid system | 5.11e-08 | 108 |
urothelium | 6.55e-08 | 5 |
transitional epithelium | 8.48e-07 | 6 |