FFCP PHASE1:Hg19::chr20:6031540..6031548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:6031540..6031548,- | |||
|coexpression_cluster_id=C548 | |||
|description=CAGE_peak_at_chr20:6031540..6031548,- | |description=CAGE_peak_at_chr20:6031540..6031548,- | ||
|id=chr20:6031540..6031548,- | |id=chr20:6031540..6031548,- | ||
|ontology_enrichment_celltype=CL:1000507!2.42e-21!12;CL:1000494!2.42e-21!12;CL:1000449!2.28e-20!16;CL:0002681!1.89e-19!13;CL:0002584!1.89e-19!13;CL:1000497!5.71e-18!18;CL:0002518!5.71e-18!18;CL:0000077!3.71e-17!19;CL:0000650!1.85e-08!3;CL:1000618!1.85e-08!3;CL:1001318!1.85e-08!3;CL:0002173!1.85e-08!3;CL:1000500!1.85e-08!3;CL:0000239!2.86e-08!3;CL:1000615!2.86e-08!3;CL:0002306!2.86e-08!3;CL:1000612!1.52e-07!7;CL:1000746!1.52e-07!7 | |ontology_enrichment_celltype=CL:1000507!2.42e-21!12;CL:1000494!2.42e-21!12;CL:1000449!2.28e-20!16;CL:0002681!1.89e-19!13;CL:0002584!1.89e-19!13;CL:1000497!5.71e-18!18;CL:0002518!5.71e-18!18;CL:0000077!3.71e-17!19;CL:0000650!1.85e-08!3;CL:1000618!1.85e-08!3;CL:1001318!1.85e-08!3;CL:0002173!1.85e-08!3;CL:1000500!1.85e-08!3;CL:0000239!2.86e-08!3;CL:1000615!2.86e-08!3;CL:0002306!2.86e-08!3;CL:1000612!1.52e-07!7;CL:1000746!1.52e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000650;7.14e-26;2!CL:1000500;7.14e-26;2!CL:1000618;7.14e-26;2!CL:1001318;7.14e-26;2!CL:0002097;7.14e-26;2!CL:0002173;7.14e-26;2!CL:1000507;9.44e-21;10!CL:1000494;9.44e-21;10!CL:0000174;9.45e-18;3!CL:0000239;9.45e-18;3!CL:1000615;9.45e-18;3!CL:0002306;9.45e-18;3!CL:0002681;1.71e-17;12!CL:0002584;1.71e-17;12!CL:1000449;3.15e-14;15!CL:0000669;1.13e-13;4!CL:1000497;1.09e-12;17!CL:0002518;1.09e-12;17!CL:0000077;1.63e-11;19!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:0000150;8.37e-07;9!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,7.14e-26,2;CL:0000650,9.18e-26,2;CL:1000500,9.18e-26,2;CL:1000618,9.18e-26,2;CL:1001318,9.18e-26,2;CL:0002173,9.18e-26,2;CL:1000507,9.44e-21,10;CL:1000494,9.44e-21,10;CL:0000239,8.00e-18,3;CL:1000615,8.00e-18,3;CL:0002306,8.00e-18,3;CL:0000174,9.46e-18,3;CL:0002681,1.71e-17,12;CL:0002584,1.71e-17,12;CL:1000449,3.15e-14,15;CL:0000669,1.29e-13,4;CL:1000497,1.09e-12,17;CL:0002518,1.09e-12,17;CL:0000077,1.63e-11,19;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7;CL:0000150,8.37e-07,9;CL:0000163,8.37e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.80e-18!14;DOID:120!8.66e-12!27;DOID:193!6.87e-11!29 | |||
|ontology_enrichment_disease_v019=DOID:170;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,1.44e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.42e-21!12;UBERON:0001231!2.42e-21!12;UBERON:0004810!2.42e-21!12;UBERON:0001851!1.67e-20!16;UBERON:0004211!2.28e-20!16;UBERON:0001285!2.28e-20!16;UBERON:0007684!2.28e-20!16;UBERON:0003220!2.28e-20!16;UBERON:0004208!2.28e-20!16;UBERON:0001225!1.89e-19!13;UBERON:0008987!1.89e-19!13;UBERON:0006555!4.24e-19!17;UBERON:0005103!4.24e-19!17;UBERON:0000083!4.24e-19!17;UBERON:0009201!4.24e-19!17;UBERON:0004819!4.24e-19!17;UBERON:0006553!4.24e-19!17;UBERON:0003074!4.24e-19!17;UBERON:0003060!4.24e-19!17;UBERON:0000080!5.71e-18!18;UBERON:0002120!5.71e-18!18;UBERON:0004875!5.71e-18!18;UBERON:0005721!5.71e-18!18;UBERON:0005754!5.71e-18!18;UBERON:0007297!5.71e-18!18;UBERON:0004876!4.75e-16!20;UBERON:0003887!3.16e-15!21;UBERON:0000353!1.16e-14!17;UBERON:0002113!1.75e-14!27;UBERON:0003918!1.75e-14!27;UBERON:0005095!1.75e-14!27;UBERON:0007687!1.75e-14!27;UBERON:0003064!9.77e-13!37;UBERON:0000058!4.62e-12!26;UBERON:0000489!5.56e-12!32;UBERON:0003886!1.08e-11!63;UBERON:0002553!2.93e-10!70;UBERON:0006554!2.98e-10!44;UBERON:0002118!3.07e-10!5;UBERON:0004532!3.07e-10!5;UBERON:0001008!5.51e-10!45;UBERON:0000464!1.01e-09!104;UBERON:0005172!1.11e-09!55;UBERON:0005173!1.11e-09!55;UBERON:0000466!1.37e-08!126;UBERON:0002417!1.58e-08!61;UBERON:0000916!1.58e-08!61;UBERON:0003567!1.85e-08!3;UBERON:0003838!1.85e-08!3;UBERON:0005169!1.85e-08!3;UBERON:0002321!1.85e-08!3;UBERON:0005215!1.85e-08!3;UBERON:0002303!1.85e-08!3;UBERON:0002319!1.85e-08!3;UBERON:0006853!2.86e-08!3;UBERON:0007685!2.86e-08!3;UBERON:0004134!2.86e-08!3;UBERON:0000074!1.52e-07!7;UBERON:0001229!1.52e-07!7;UBERON:0001230!1.52e-07!7;UBERON:0005749!1.52e-07!7;UBERON:0004199!1.52e-07!7;UBERON:0004209!1.52e-07!7;UBERON:0004198!1.52e-07!7;UBERON:0002171!5.75e-07!1;UBERON:0006518!5.75e-07!1;UBERON:0008949!5.75e-07!1;UBERON:0000101!5.75e-07!1;UBERON:0002167!5.75e-07!1;UBERON:0005177!6.77e-07!107;UBERON:0000992!8.51e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;2.45e-30;15!UBERON:0003567;7.14e-26;2!UBERON:0003838;7.14e-26;2!UBERON:0003586;7.14e-26;2!UBERON:0005169;7.14e-26;2!UBERON:0002321;7.14e-26;2!UBERON:0005215;7.14e-26;2!UBERON:0002303;7.14e-26;2!UBERON:0002319;7.14e-26;2!UBERON:0004211;9.44e-21;10!UBERON:0009773;9.44e-21;10!UBERON:0001231;9.44e-21;10!UBERON:0004810;9.44e-21;10!UBERON:0002369;9.45e-18;3!UBERON:0001235;9.45e-18;3!UBERON:0006858;9.45e-18;3!UBERON:0006853;9.45e-18;3!UBERON:0007685;9.45e-18;3!UBERON:0004134;9.45e-18;3!UBERON:0001225;1.71e-17;12!UBERON:0008987;1.71e-17;12!UBERON:0006555;3.15e-14;15!UBERON:0000353;3.15e-14;15!UBERON:0004819;3.15e-14;15!UBERON:0001285;3.15e-14;15!UBERON:0007684;3.15e-14;15!UBERON:0003891;1.13e-13;4!UBERON:0002113;2.67e-09;24!UBERON:0011143;2.67e-09;24!UBERON:0005172;2.03e-08;52!UBERON:0005173;2.03e-08;52!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0000489;7.15e-08;29!UBERON:0006554;1.21e-07;30!UBERON:0001008;1.21e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,2.45e-30,15;UBERON:0003567,9.18e-26,2;UBERON:0003838,9.18e-26,2;UBERON:0003586,9.18e-26,2;UBERON:0005169,9.18e-26,2;UBERON:0002321,9.18e-26,2;UBERON:0005215,9.18e-26,2;UBERON:0002303,9.18e-26,2;UBERON:0002319,9.18e-26,2;UBERON:0004810,9.44e-21,10;UBERON:0006853,8.00e-18,3;UBERON:0007685,8.00e-18,3;UBERON:0004134,8.00e-18,3;UBERON:0002369,9.46e-18,3;UBERON:0001235,9.46e-18,3;UBERON:0006858,9.46e-18,3;UBERON:0001225,1.71e-17,12;UBERON:0008987,1.71e-17,12;UBERON:0004211,3.15e-14,15;UBERON:0009773,3.15e-14,15;UBERON:0000353,3.15e-14,15;UBERON:0001231,3.15e-14,15;UBERON:0001285,3.15e-14,15;UBERON:0007684,3.15e-14,15;UBERON:0004208,3.15e-14,15;UBERON:0003891,1.29e-13,4;UBERON:0006555,2.07e-13,16;UBERON:0004819,2.07e-13,16;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0002113,1.15e-08,26;UBERON:0003918,1.15e-08,26;UBERON:0011143,1.15e-08,26;UBERON:0005095,1.15e-08,26;UBERON:0007687,1.15e-08,26;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60;UBERON:0003064,4.21e-08,28;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000489,1.99e-07,31;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p@chr20:6031540..6031548,- | |short_description=p@chr20:6031540..6031548,- | ||
}} | }} |
Latest revision as of 16:03, 28 July 2015
Short description: | p@chr20:6031540..6031548, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:6031540..6031548, - |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 7.14e-26 | 2 |
mesangial cell | 9.18e-26 | 2 |
kidney interstitial cell | 9.18e-26 | 2 |
juxtaglomerular complex cell | 9.18e-26 | 2 |
renal interstitial pericyte | 9.18e-26 | 2 |
extraglomerular mesangial cell | 9.18e-26 | 2 |
kidney tubule cell | 9.44e-21 | 10 |
nephron tubule epithelial cell | 9.44e-21 | 10 |
brush border epithelial cell | 8.00e-18 | 3 |
kidney cortex tubule cell | 8.00e-18 | 3 |
epithelial cell of proximal tubule | 8.00e-18 | 3 |
steroid hormone secreting cell | 9.46e-18 | 3 |
kidney cortical cell | 1.71e-17 | 12 |
renal cortical epithelial cell | 1.71e-17 | 12 |
epithelial cell of nephron | 3.15e-14 | 15 |
pericyte cell | 1.29e-13 | 4 |
kidney cell | 1.09e-12 | 17 |
kidney epithelial cell | 1.09e-12 | 17 |
mesothelial cell | 1.63e-11 | 19 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
glandular epithelial cell | 8.37e-07 | 9 |
endocrine cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 1.44e-09 | 6 |