FFCP PHASE1:Hg19::chr21:17726230..17726234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:17726230..17726234,+ | |||
|description=CAGE_peak_at_chr21:17726230..17726234,+ | |description=CAGE_peak_at_chr21:17726230..17726234,+ | ||
|id=chr21:17726230..17726234,+ | |id=chr21:17726230..17726234,+ | ||
|ontology_enrichment_celltype=CL:0002568!1.44e-07!1 | |ontology_enrichment_celltype=CL:0002568!1.44e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.24e-15;2!CL:0000137;1.24e-15;2!CL:0000092;1.24e-15;2!CL:0002178;1.20e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.33e-15,2;CL:0000137,1.33e-15,2;CL:0000092,1.33e-15,2;CL:0002178,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.93e-07;5 | |||
|ontology_enrichment_disease=DOID:3093!1.14e-08!11;DOID:0060085!2.89e-08!1;DOID:3165!2.89e-08!1;DOID:0060121!2.89e-08!1;DOID:2438!2.89e-08!1;DOID:4418!2.89e-08!1;DOID:2355!1.99e-07!1;DOID:162!5.30e-07!235;DOID:14566!8.93e-07!239 | |ontology_enrichment_disease=DOID:3093!1.14e-08!11;DOID:0060085!2.89e-08!1;DOID:3165!2.89e-08!1;DOID:0060121!2.89e-08!1;DOID:2438!2.89e-08!1;DOID:4418!2.89e-08!1;DOID:2355!1.99e-07!1;DOID:162!5.30e-07!235;DOID:14566!8.93e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060085;8.64e-30;1!DOID:3165;8.64e-30;1!DOID:0060121;8.64e-30;1!DOID:2438;8.64e-30;1!DOID:4418;8.64e-30;1!DOID:200;1.24e-15;2!DOID:4305;1.24e-15;2!DOID:0060058;2.74e-12;10!DOID:0060072;1.76e-08;4!DOID:2531;8.72e-08;51!DOID:0060083;8.72e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.99e-30,1;DOID:3165,9.99e-30,1;DOID:0060121,9.99e-30,1;DOID:2438,9.99e-30,1;DOID:4418,9.99e-30,1;DOID:200,1.33e-15,2;DOID:4305,1.33e-15,2;DOID:0060058,2.81e-12,10;DOID:2531,2.17e-09,51;DOID:0060083,2.17e-09,51;DOID:0060072,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000002!5.69e-10!6;UBERON:0001560!5.69e-10!6 | |ontology_enrichment_uberon=UBERON:0000002!5.69e-10!6;UBERON:0001560!5.69e-10!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.57e-11;3!UBERON:0000014;1.76e-08;4!UBERON:0002046;4.93e-07;5!UBERON:0004177;5.54e-07;5!UBERON:0005057;5.54e-07;5!UBERON:0000945;6.77e-07;5!UBERON:0010039;6.77e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.69e-15,8;UBERON:0010039,4.69e-15,8;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0000014,1.82e-08,4;UBERON:0002046,4.79e-07,5;UBERON:0004117,4.79e-07,5;UBERON:0007689,4.79e-07,5;UBERON:0007123,4.79e-07,5;UBERON:0003091,4.79e-07,5 | |||
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|short_description=p@chr21:17726230..17726234,+ | |short_description=p@chr21:17726230..17726234,+ | ||
}} | }} |
Latest revision as of 16:49, 28 July 2015
Short description: | p@chr21:17726230..17726234, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:17726230..17726234, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.33e-15 | 2 |
osteocyte | 1.33e-15 | 2 |
osteoclast | 1.33e-15 | 2 |
epithelial cell of stomach | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 4.69e-15 | 8 |
food storage organ | 4.69e-15 | 8 |
spleen | 8.99e-11 | 3 |
gastrointestinal system mesentery | 8.99e-11 | 3 |
stomach region | 8.99e-11 | 3 |
mesentery | 8.99e-11 | 3 |
gastrointestinal system serosa | 8.99e-11 | 3 |
mesentery of stomach | 8.99e-11 | 3 |
gut mesentery | 8.99e-11 | 3 |
dorsal mesentery | 8.99e-11 | 3 |
dorsal mesogastrium | 8.99e-11 | 3 |
peritoneal cavity | 8.99e-11 | 3 |
spleen primordium | 8.99e-11 | 3 |
zone of skin | 1.82e-08 | 4 |
thyroid gland | 4.79e-07 | 5 |
pharyngeal pouch | 4.79e-07 | 5 |
thyroid diverticulum | 4.79e-07 | 5 |
pharyngeal pouch 2 | 4.79e-07 | 5 |
thyroid primordium | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.99e-30 | 1 |
skin benign neoplasm | 9.99e-30 | 1 |
integumentary system benign neoplasm | 9.99e-30 | 1 |
dermis tumor | 9.99e-30 | 1 |
cutaneous fibrous histiocytoma | 9.99e-30 | 1 |
giant cell tumor | 1.33e-15 | 2 |
bone giant cell tumor | 1.33e-15 | 2 |
lymphoma | 2.81e-12 | 10 |
hematologic cancer | 2.17e-09 | 51 |
immune system cancer | 2.17e-09 | 51 |
benign neoplasm | 1.82e-08 | 4 |