FFCP PHASE1:Hg19::chr22:37524609..37524638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:37524609..37524638,+ | |||
|coexpression_cluster_id=C2644 | |||
|description=CAGE_peak_at_chr22:37524609..37524638,+ | |||
|id=chr22:37524609..37524638,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.49e-25!52;CL:0000542!1.12e-24!53;CL:0000051!1.12e-24!53;CL:0000084!5.61e-22!25;CL:0000827!5.61e-22!25;CL:0000791!1.61e-18!18;CL:0000789!1.61e-18!18;CL:0002420!1.61e-18!18;CL:0002419!1.61e-18!18;CL:0000790!1.61e-18!18;CL:0002087!3.50e-15!119;CL:0000738!9.18e-15!140;CL:0000988!4.65e-13!182;CL:0000080!2.56e-12!6;CL:0002031!2.56e-11!124;CL:0000624!2.73e-11!6;CL:0000037!3.08e-11!172;CL:0000566!3.08e-11!172;CL:0002032!6.60e-10!165;CL:0000837!6.60e-10!165;CL:0000625!4.09e-08!11;CL:0000623!1.19e-07!3;CL:0000825!1.19e-07!3;CL:0002541!3.91e-07!3;CL:0000842!9.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.52e-22;25!CL:0000542;3.41e-18;53!CL:0000623;6.97e-17;3!CL:0000791;8.13e-13;18!CL:0000789;8.13e-13;18!CL:0002419;8.13e-13;18!CL:0000945;3.99e-09;24!CL:0002541;5.72e-08;3!CL:0002087;1.07e-07;104!CL:0000625;1.60e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.10e-38,52;CL:0000542,2.01e-37,53;CL:0000051,2.01e-37,53;CL:0000084,1.17e-22,25;CL:0000827,1.17e-22,25;CL:0002087,8.05e-18,115;CL:0000623,7.18e-17,3;CL:0000825,7.18e-17,3;CL:0002031,3.10e-15,120;CL:0000738,2.65e-14,136;CL:0000791,5.93e-13,18;CL:0000789,5.93e-13,18;CL:0002420,5.93e-13,18;CL:0002419,5.93e-13,18;CL:0000790,5.93e-13,18;CL:0000988,3.21e-12,177;CL:0000037,1.22e-10,168;CL:0002032,3.73e-10,161;CL:0000837,3.73e-10,161;CL:0000945,4.13e-09,24;CL:0000826,4.13e-09,24;CL:0002541,6.35e-08,3;CL:0000625,1.45e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.41e-18;53!CL:0000790;8.13e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.69e-07;1!DOID:0060061;7.69e-07;1!DOID:8691;7.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.49e-07,1;DOID:0060061,7.49e-07,1;DOID:8691,7.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.86e-15!15;UBERON:0000179!6.86e-15!15;UBERON:0000463!6.86e-15!15;UBERON:0004177!3.99e-12!7;UBERON:0002370!8.08e-08!4;UBERON:0005058!8.08e-08!4;UBERON:0009113!8.08e-08!4;UBERON:0003295!8.08e-08!4;UBERON:0005562!8.08e-08!4;UBERON:0000476!3.91e-07!3;UBERON:0000920!3.91e-07!3;UBERON:0002193!5.26e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.66e-20;15!UBERON:0000179;2.66e-20;15!UBERON:0000463;2.66e-20;15!UBERON:0002390;2.95e-11;32!UBERON:0003124;5.72e-08;3!UBERON:0000920;5.72e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.78e-20,15;UBERON:0000179,2.78e-20,15;UBERON:0000463,2.78e-20,15;UBERON:0000920,6.35e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,1.39571002064908,1.10195093839151,0.393364276848904,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,3.53709686474248,1.64481199199607,1.5046784585161,0.651844533267181,0,0,0.891283655081389,0.589211814949674,0.443067789167242,2.97884250141517,3.71464827204458,4.55207716459574,1.47994114143309,2.48715016007264,0.869409257205157,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,1.24930726552346,0.473554504088034,0.821127996921047,2.82249440514625,4.54648332831962,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,11.2307533315099,3.88129634747131,8.2139543219039,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.82707210449155,0.862856803274467,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,0,0,1.19115887728894,0,1.94541993357815,1.08006287447623,3.96562588147135,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,1.19372242368845,0,0,0,0,0,3.95529298144223,0,0,0.276283915531148,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.269272933229316,0,2.23300811812344,0.824378340616761,4.26427820814908,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,2.71840665682306,4.9078316267564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,10.2526068168933,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,2.65013777824443,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5992689595859,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.79832133146375,1.72850981333669,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0.751871343838829,0.322289439867886,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0,0,0.452122368852043,0.31037357147929,0,0,0,0,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,1.60284246151616 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| ||
|short_description=p@chr22:37524609..37524638,+ | |||
}} | }} |
Latest revision as of 20:53, 28 July 2015
Short description: | p@chr22:37524609..37524638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37524609..37524638, + |
Coexpression cluster: | C2644_mycosis_Natural_hairy_cord_anaplastic_CD4_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.10e-38 | 52 |
lymphocyte | 2.01e-37 | 53 |
common lymphoid progenitor | 2.01e-37 | 53 |
T cell | 1.17e-22 | 25 |
pro-T cell | 1.17e-22 | 25 |
nongranular leukocyte | 8.05e-18 | 115 |
natural killer cell | 7.18e-17 | 3 |
pro-NK cell | 7.18e-17 | 3 |
hematopoietic lineage restricted progenitor cell | 3.10e-15 | 120 |
leukocyte | 2.65e-14 | 136 |
mature alpha-beta T cell | 5.93e-13 | 18 |
alpha-beta T cell | 5.93e-13 | 18 |
immature T cell | 5.93e-13 | 18 |
mature T cell | 5.93e-13 | 18 |
immature alpha-beta T cell | 5.93e-13 | 18 |
hematopoietic cell | 3.21e-12 | 177 |
hematopoietic stem cell | 1.22e-10 | 168 |
hematopoietic oligopotent progenitor cell | 3.73e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.73e-10 | 161 |
lymphocyte of B lineage | 4.13e-09 | 24 |
pro-B cell | 4.13e-09 | 24 |
chorionic membrane mesenchymal stem cell | 6.35e-08 | 3 |
CD8-positive, alpha-beta T cell | 1.45e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 2.78e-20 | 15 |
haemolymphatic fluid | 2.78e-20 | 15 |
organism substance | 2.78e-20 | 15 |
egg chorion | 6.35e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.49e-07 | 1 |
cutaneous T cell lymphoma | 7.49e-07 | 1 |
mycosis fungoides | 7.49e-07 | 1 |