FFCP PHASE1:Hg19::chr2:159994580..159994629,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:159994580..159994629,+
|short_description=p@chr2:159994580..159994629,+
|description=CAGE_peak_at_chr2:159994580..159994629,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:159994580..159994629,+ | |||
|coexpression_cluster_id=C2664 | |||
|description=CAGE_peak_at_chr2:159994580..159994629,+ | |||
|id=chr2:159994580..159994629,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002589;1.92e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,1.52e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;5.61e-13;2!DOID:114;2.16e-12;2!DOID:6193;1.64e-07;1!DOID:8552;1.98e-07;1!DOID:3571;3.82e-07;1!DOID:178;8.92e-07;1!DOID:326;8.92e-07;1!DOID:3978;8.92e-07;1!DOID:3394;8.92e-07;1!DOID:5844;8.92e-07;1!DOID:3112;8.92e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,4.70e-13,2;DOID:114,1.71e-12,2;DOID:6193,1.65e-07,1;DOID:8552,1.98e-07,1;DOID:3571,3.20e-07,1;DOID:178,7.29e-07,1;DOID:326,7.29e-07,1;DOID:3978,7.29e-07,1;DOID:3394,7.29e-07,1;DOID:5844,7.29e-07,1;DOID:3112,8.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.12e-10!27;UBERON:0000948!6.71e-08!24;UBERON:0005498!6.71e-08!24;UBERON:0004140!6.71e-08!24;UBERON:0009881!6.71e-08!24;UBERON:0004141!6.71e-08!24;UBERON:0003084!6.71e-08!24;UBERON:0007005!6.71e-08!24;UBERON:0004139!6.71e-08!24;UBERON:0004291!6.71e-08!24;UBERON:0004872!1.71e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.92e-12;2!UBERON:0007204;1.92e-12;2!UBERON:0007100;3.18e-10;25!UBERON:0003978;1.39e-08;3!UBERON:0000946;1.39e-08;3!UBERON:0002135;3.82e-07;1!UBERON:0002146;5.78e-07;1!UBERON:0005623;5.78e-07;1!UBERON:0004573;7.68e-07;33!UBERON:0004571;7.68e-07;33!UBERON:0007195;8.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,4.50e-13,7;UBERON:0001529,1.52e-12,2;UBERON:0007204,1.52e-12,2;UBERON:0007100,2.15e-09,27;UBERON:0003978,1.68e-08,3;UBERON:0009751,1.68e-08,3;UBERON:0000946,1.68e-08,3;UBERON:0002523,1.68e-08,3;UBERON:0005983,1.68e-08,3;UBERON:0002165,1.68e-08,3;UBERON:0002062,1.68e-08,3;UBERON:0007280,1.68e-08,3;UBERON:0004573,1.42e-07,33;UBERON:0004571,1.42e-07,33;UBERON:0002135,4.31e-07,1;UBERON:0002146,6.88e-07,1;UBERON:0005623,6.88e-07,1 | |||
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| ||
|short_description=p@chr2:159994580..159994629,+ | |||
}} | }} |
Latest revision as of 01:45, 29 July 2015
Short description: | p@chr2:159994580..159994629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:159994580..159994629, + |
Coexpression cluster: | C2664_leukemia_signet_epithelioid_chronic_acute_small_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 1.52e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 4.50e-13 | 7 |
brachiocephalic artery | 1.52e-12 | 2 |
brachiocephalic vasculature | 1.52e-12 | 2 |
primary circulatory organ | 2.15e-09 | 27 |
valve | 1.68e-08 | 3 |
cardiac mesenchyme | 1.68e-08 | 3 |
cardial valve | 1.68e-08 | 3 |
tunica intima | 1.68e-08 | 3 |
heart layer | 1.68e-08 | 3 |
endocardium | 1.68e-08 | 3 |
endocardial cushion | 1.68e-08 | 3 |
presumptive endocardium | 1.68e-08 | 3 |
systemic artery | 1.42e-07 | 33 |
systemic arterial system | 1.42e-07 | 33 |
mitral valve | 4.31e-07 | 1 |
pulmonary valve | 6.88e-07 | 1 |
semi-lunar valve | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 4.70e-13 | 2 |
heart disease | 1.71e-12 | 2 |
epithelioid sarcoma | 1.65e-07 | 1 |
chronic myeloid leukemia | 1.98e-07 | 1 |
liver cancer | 3.20e-07 | 1 |
vascular disease | 7.29e-07 | 1 |
ischemia | 7.29e-07 | 1 |
extrinsic cardiomyopathy | 7.29e-07 | 1 |
myocardial ischemia | 7.29e-07 | 1 |
myocardial infarction | 7.29e-07 | 1 |
papillary adenocarcinoma | 8.67e-07 | 1 |