FFCP PHASE1:Hg19::chr2:18903607..18903611,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:18903607..18903611,+ | |||
|description=CAGE_peak_at_chr2:18903607..18903611,+ | |||
|id=chr2:18903607..18903611,+ | |||
|ontology_enrichment_celltype=CL:0000569!7.79e-13!4;CL:0000011!7.79e-13!4;CL:1000306!1.36e-12!4;CL:0002547!1.36e-12!4;CL:0002583!1.62e-11!2;CL:0000057!1.15e-07!75;CL:0002591!5.13e-07!1;CL:0002334!5.44e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.05e-29;1!CL:0002591;2.05e-29;1!CL:1000306;2.18e-08;4!CL:0002547;2.18e-08;4!CL:0000569;2.18e-08;4!CL:0000077;5.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.37e-29,1;CL:1000306,2.43e-08,4;CL:0002547,2.43e-08,4;CL:0000569,2.61e-08,4;CL:0000011,2.61e-08,4;CL:0000077,5.34e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000011;2.18e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!1.36e-12!4;UBERON:0007240!1.36e-12!4;UBERON:0005742!1.36e-12!4;UBERON:0005734!1.36e-12!4;UBERON:0004664!1.36e-12!4;UBERON:0004663!1.36e-12!4;UBERON:0000948!1.24e-07!24;UBERON:0005498!1.24e-07!24;UBERON:0004140!1.24e-07!24;UBERON:0009881!1.24e-07!24;UBERON:0004141!1.24e-07!24;UBERON:0003084!1.24e-07!24;UBERON:0007005!1.24e-07!24;UBERON:0004139!1.24e-07!24;UBERON:0004291!1.24e-07!24;UBERON:0002426!6.08e-07!1;UBERON:0003831!6.08e-07!1;UBERON:0003898!6.08e-07!1;UBERON:0004830!6.08e-07!1;UBERON:0001774!6.08e-07!1;UBERON:0003830!6.08e-07!1;UBERON:0005175!6.08e-07!1;UBERON:0003897!6.08e-07!1;UBERON:0001103!6.08e-07!1;UBERON:0010084!6.08e-07!1;UBERON:0002079!6.80e-07!1;UBERON:0004872!7.30e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.91e-15;2!UBERON:0002012;1.91e-15;2!UBERON:0008886;1.91e-15;2!UBERON:0004797;2.18e-08;4!UBERON:0000415;2.18e-08;4!UBERON:0007240;2.18e-08;4!UBERON:0005742;2.18e-08;4!UBERON:0005734;2.18e-08;4!UBERON:0004664;2.18e-08;4!UBERON:0004663;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.05e-15,2;UBERON:0007497,2.05e-15,2;UBERON:0003643,2.05e-15,2;UBERON:0003504,2.05e-15,2;UBERON:0003469,2.05e-15,2;UBERON:0003496,2.05e-15,2;UBERON:0002012,2.05e-15,2;UBERON:0008886,2.05e-15,2;UBERON:0007303,2.05e-15,2;UBERON:0002061,2.05e-15,2;UBERON:0005432,2.05e-15,2;UBERON:0004363,2.05e-15,2;UBERON:0004145,9.90e-11,3;UBERON:0000415,2.43e-08,4;UBERON:0007240,2.43e-08,4;UBERON:0005742,2.43e-08,4;UBERON:0005734,2.43e-08,4;UBERON:0004664,2.43e-08,4;UBERON:0004663,2.43e-08,4;UBERON:0003498,6.04e-07,5;UBERON:0005985,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,1.50719688529793,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.532685175939381,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717149357331379,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.233713309847224,0,0,0,0,0.228840068396924,1.05861646634267,0.621748802331122,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,2.68633261622231,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:18903607..18903611,+ | |||
}} |
Latest revision as of 04:12, 29 July 2015
Short description: | p@chr2:18903607..18903611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:18903607..18903611, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.37e-29 | 1 |
fibroblast of tunica adventitia of artery | 2.43e-08 | 4 |
fibroblast of the aortic adventitia | 2.43e-08 | 4 |
cardiac mesenchymal cell | 2.61e-08 | 4 |
migratory trunk neural crest cell | 2.61e-08 | 4 |
mesothelial cell | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.05e-15 | 2 |
developing epithelial placode | 2.05e-15 | 2 |
respiratory system arterial blood vessel | 2.05e-15 | 2 |
respiratory system blood vessel | 2.05e-15 | 2 |
respiratory system artery | 2.05e-15 | 2 |
head blood vessel | 2.05e-15 | 2 |
pulmonary artery | 2.05e-15 | 2 |
pulmonary vascular system | 2.05e-15 | 2 |
pharyngeal vasculature | 2.05e-15 | 2 |
truncus arteriosus | 2.05e-15 | 2 |
aortic sac | 2.05e-15 | 2 |
pharyngeal arch artery | 2.05e-15 | 2 |
outflow tract | 9.90e-11 | 3 |
artery wall | 2.43e-08 | 4 |
tunica adventitia of artery | 2.43e-08 | 4 |
adventitia | 2.43e-08 | 4 |
tunica adventitia of blood vessel | 2.43e-08 | 4 |
aorta tunica adventitia | 2.43e-08 | 4 |
aorta wall | 2.43e-08 | 4 |
heart blood vessel | 6.04e-07 | 5 |
coronary vessel | 6.04e-07 | 5 |