FFCP PHASE1:Hg19::chr2:197890756..197890770,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:197890756..197890770,-
|short_description=p@chr2:197890756..197890770,-
|description=CAGE_peak_at_chr2:197890756..197890770,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:197890756..197890770,- | |||
|coexpression_cluster_id=C615 | |||
|description=CAGE_peak_at_chr2:197890756..197890770,- | |||
|id=chr2:197890756..197890770,- | |||
|ontology_enrichment_celltype=CL:0000738!9.22e-36!140;CL:0000037!1.00e-33!172;CL:0000566!1.00e-33!172;CL:0002087!2.18e-32!119;CL:0000988!2.49e-31!182;CL:0002032!1.48e-30!165;CL:0000837!1.48e-30!165;CL:0002031!1.11e-29!124;CL:0000542!1.16e-25!53;CL:0000051!1.16e-25!53;CL:0000838!4.36e-25!52;CL:0000084!1.51e-13!25;CL:0000827!1.51e-13!25;CL:0000791!5.38e-13!18;CL:0000789!5.38e-13!18;CL:0002420!5.38e-13!18;CL:0002419!5.38e-13!18;CL:0000790!5.38e-13!18;CL:0002057!8.49e-13!42;CL:0000860!3.39e-11!45;CL:0000236!1.02e-10!14;CL:0000945!2.89e-10!24;CL:0000826!2.89e-10!24;CL:0000763!1.15e-09!112;CL:0000049!1.15e-09!112;CL:0000766!2.69e-09!76;CL:0002009!1.09e-08!65;CL:0000557!1.22e-08!71;CL:0002194!6.61e-08!63;CL:0000576!6.61e-08!63;CL:0000040!6.61e-08!63;CL:0000559!6.61e-08!63;CL:0000839!1.31e-07!70;CL:0000625!2.32e-07!11;CL:0000624!8.64e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.37e-20;13!CL:0000542;2.18e-16;53!CL:0000791;9.30e-14;18!CL:0000789;9.30e-14;18!CL:0002419;9.30e-14;18!CL:0000624;8.39e-12;6!CL:0000084;2.45e-11;25!CL:0000945;9.83e-10;24!CL:0000623;2.04e-09;3!CL:0000226;2.31e-09;3!CL:0000842;2.31e-09;3!CL:0002087;1.20e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.22e-25,52;CL:0000542,1.30e-24,53;CL:0000051,1.30e-24,53;CL:0002087,5.16e-23,115;CL:0000738,1.37e-20,136;CL:0000236,1.07e-18,14;CL:0000037,7.06e-18,168;CL:0002031,2.19e-17,120;CL:0000988,2.04e-16,177;CL:0002032,1.40e-15,161;CL:0000837,1.40e-15,161;CL:0000791,6.55e-14,18;CL:0000789,6.55e-14,18;CL:0002420,6.55e-14,18;CL:0002419,6.55e-14,18;CL:0000790,6.55e-14,18;CL:0000624,6.63e-12,6;CL:0000084,2.07e-11,25;CL:0000827,2.07e-11,25;CL:0000945,5.82e-10,24;CL:0000826,5.82e-10,24;CL:0000623,1.89e-09,3;CL:0000825,1.89e-09,3;CL:0000226,2.24e-09,3;CL:0000842,2.24e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.18e-16;53!CL:0000790;9.30e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-16!102;UBERON:0003061!1.31e-16!102;UBERON:0002193!5.81e-14!112;UBERON:0000178!1.85e-11!15;UBERON:0000179!1.85e-11!15;UBERON:0000463!1.85e-11!15;UBERON:0007023!3.67e-08!115;UBERON:0002371!7.30e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.20e-24;15!UBERON:0000179;4.20e-24;15!UBERON:0000463;4.20e-24;15!UBERON:0002390;5.86e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.73e-24,15;UBERON:0000179,5.73e-24,15;UBERON:0000463,5.73e-24,15;UBERON:0002390,2.83e-09,98;UBERON:0003061,2.83e-09,98;UBERON:0002193,6.67e-08,108 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.293600439334847,0.553995408531877,3.20871115952227,1.73608696572681,0,0.971680998056939,0,0.872389432677388,0,2.66842467306598,0.929716147622738,0.411167888021826,0.309706370895104,0.28769239232215,1.7931249457037,0.709446689665756,0,0,0,1.31769637679823,0.818718450173537,0.224723484445085,0.918251677112708,0,0.639337125799041,1.64925650093358,0.398927315243264,1.27867425159808,0,0,0.622822248995575,0.75374599577023,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0.845021145247767,0.425208599930087,0.419317291016752,1.12328631146495,1.50176892841506,0.16072558669708,0.570025487482497,0,0.730656615058536,1.75996244461323,1.63841583378639,4.44754626931777,7.25441378363062,1.60158394814405,2.87376219977242,1.32208974556972,0.954053754535364,7.96898156753228,4.11066032559657,5.73409842187843,0,0,0,1.57367816091066,5.10913991573914,3.90642848099067,1.00311897234407,0.977766799900771,1.4203434172042,0,1.33692548262208,2.3568472597987,2.43687284041983,0.270803863765016,2.0494611156108,1.30059347559878,2.95988228286617,2.48715016007264,1.15921234294021,1.92772532110679,1.60524496853828,1.04535523804977,1.35971211237079,2.68254345521345,1.03088233644789,0,0.637130828648193,1.30216690771284,0.950452044448374,0.903450714466637,0.127986611154418,0,0.473554504088034,1.64225599384209,3.62892137804518,6.41856469880418,3.62061009706997,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.672510863961164,2.36436912242313,4.09692392233083,2.82354679815446,0.254094624222463,0,2.31986643833309,0,1.27587750330633,1.49801404789436,5.9832291840805,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,2.68798433959754,3.8828556147351,2.34800627167578,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.330037999682352,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,1.01489521846434,2.29391162142713,3.41788312304498,1.42939065274673,1.64544909234478,1.29694662238543,2.16012574895246,6.34500141035416,0,0,0,0.557409525377156,0,0,0.159426272728822,0.199579371432817,0,0.635020748171649,0,0,0.228234679033192,0.156679895773023,0,0.338583555603207,0.321176150207399,0.201799707191048,1.27753871307098,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,2.81974010175699,0,0,0,0.557216921387392,0,0,0,0,0,0.422008249231538,0,0,0.211125408127993,0.398495976502139,0.828851746593443,0.251932747854276,0,0,0,0,0,1.02314474045374,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0,0,0,0,0.153900517007594,0,0,0,0.217294743844016,0,0,0,2.04386596391473,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.265372693510018,0,0.593042257361244,0.247127877893006,0,0.269604531922708,0,0,0.182454789215666,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0.505492637027904,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0,0,0.410716136675979,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.449947783103001,0.77380195455795,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0.988058159489721,0.487170393523584,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.18628920882415,0.138348634936231,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0.464033759878494,0,0.800055529326307,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0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| ||
|short_description=p@chr2:197890756..197890770,- | |||
}} | }} |
Latest revision as of 04:40, 29 July 2015
Short description: | p@chr2:197890756..197890770, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:197890756..197890770, - |
Coexpression cluster: | C615_CD19_Neutrophils_Eosinophils_CD4_CD8_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.22e-25 | 52 |
lymphocyte | 1.30e-24 | 53 |
common lymphoid progenitor | 1.30e-24 | 53 |
nongranular leukocyte | 5.16e-23 | 115 |
leukocyte | 1.37e-20 | 136 |
B cell | 1.07e-18 | 14 |
hematopoietic stem cell | 7.06e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 2.19e-17 | 120 |
hematopoietic cell | 2.04e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.40e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.40e-15 | 161 |
mature alpha-beta T cell | 6.55e-14 | 18 |
alpha-beta T cell | 6.55e-14 | 18 |
immature T cell | 6.55e-14 | 18 |
mature T cell | 6.55e-14 | 18 |
immature alpha-beta T cell | 6.55e-14 | 18 |
CD4-positive, alpha-beta T cell | 6.63e-12 | 6 |
T cell | 2.07e-11 | 25 |
pro-T cell | 2.07e-11 | 25 |
lymphocyte of B lineage | 5.82e-10 | 24 |
pro-B cell | 5.82e-10 | 24 |
natural killer cell | 1.89e-09 | 3 |
pro-NK cell | 1.89e-09 | 3 |
single nucleate cell | 2.24e-09 | 3 |
mononuclear cell | 2.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.73e-24 | 15 |
haemolymphatic fluid | 5.73e-24 | 15 |
organism substance | 5.73e-24 | 15 |
hematopoietic system | 2.83e-09 | 98 |
blood island | 2.83e-09 | 98 |
hemolymphoid system | 6.67e-08 | 108 |