FFCP PHASE1:Hg19::chr2:66670833..66670853,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:66670833..66670853,+
|short_description=p@chr2:66670833..66670853,+
|description=CAGE_peak_at_chr2:66670833..66670853,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:66670833..66670853,+ | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_at_chr2:66670833..66670853,+ | |||
|id=chr2:66670833..66670853,+ | |||
|ontology_enrichment_celltype=CL:0000064!5.73e-09!3;CL:0005012!5.73e-09!3;CL:0000067!5.73e-09!3;CL:0002304!5.73e-09!3;CL:0002622!1.73e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.04e-47;3!CL:0000067;4.04e-47;3!CL:0005012;4.04e-47;3!CL:0002304;4.04e-47;3!CL:0000342;1.78e-16;1!CL:0002565;1.78e-16;1!CL:0002591;1.78e-16;1!CL:0000075;1.51e-09;27!CL:0000650;6.67e-09;2!CL:1000500;6.67e-09;2!CL:1000618;6.67e-09;2!CL:1001318;6.67e-09;2!CL:0002173;6.67e-09;2!CL:0000710;1.29e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.05e-47,3;CL:0000067,4.05e-47,3;CL:0005012,4.05e-47,3;CL:0002304,4.05e-47,3;CL:0000342,1.65e-16,1;CL:0002565,1.65e-16,1;CL:0002591,1.93e-16,1;CL:0000075,1.51e-09,27;CL:0000650,8.09e-09,2;CL:1000500,8.09e-09,2;CL:1000618,8.09e-09,2;CL:1001318,8.09e-09,2;CL:0002173,8.09e-09,2;CL:0000710,1.29e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.73e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000488;9.63e-62;4!UBERON:0001778;4.04e-47;3!UBERON:0001775;4.04e-47;3!UBERON:0002203;2.33e-41;6!UBERON:0001768;2.33e-41;6!UBERON:0002200;2.33e-41;6!UBERON:0007625;4.06e-35;11!UBERON:0001801;1.23e-27;14!UBERON:0006876;8.83e-23;11!UBERON:0000019;2.10e-20;19!UBERON:0000047;2.10e-20;19!UBERON:0004088;2.10e-20;19!UBERON:0010230;2.10e-20;19!UBERON:0000970;2.17e-19;20!UBERON:0002104;1.80e-18;21!UBERON:0001456;1.80e-18;21!UBERON:0010371;9.48e-18;31!UBERON:0000020;7.14e-17;23!UBERON:0002506;1.78e-16;1!UBERON:0001769;1.78e-16;1!UBERON:0001032;3.57e-16;24!UBERON:0004456;3.57e-16;24!UBERON:0000078;6.67e-09;2!UBERON:0003567;6.67e-09;2!UBERON:0003838;6.67e-09;2!UBERON:0003586;6.67e-09;2!UBERON:0005169;6.67e-09;2!UBERON:0002321;6.67e-09;2!UBERON:0002012;6.67e-09;2!UBERON:0005215;6.67e-09;2!UBERON:0002303;6.67e-09;2!UBERON:0008886;6.67e-09;2!UBERON:0002319;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,8.93e-62,4;UBERON:0001778,4.05e-47,3;UBERON:0001775,4.05e-47,3;UBERON:0002203,2.21e-41,6;UBERON:0001768,2.21e-41,6;UBERON:0002200,2.21e-41,6;UBERON:0007625,3.93e-35,11;UBERON:0001801,1.20e-27,14;UBERON:0006876,8.59e-23,11;UBERON:0000019,2.13e-19,20;UBERON:0000047,2.13e-19,20;UBERON:0010312,2.13e-19,20;UBERON:0004088,2.13e-19,20;UBERON:0010230,2.13e-19,20;UBERON:0003072,2.13e-19,20;UBERON:0004128,2.13e-19,20;UBERON:0003071,2.13e-19,20;UBERON:0000970,1.77e-18,21;UBERON:0002104,1.77e-18,21;UBERON:0001456,1.21e-17,22;UBERON:0002506,1.65e-16,1;UBERON:0001769,1.65e-16,1;UBERON:0000020,3.52e-16,24;UBERON:0001032,3.52e-16,24;UBERON:0004456,3.52e-16,24;UBERON:0005085,1.54e-12,31;UBERON:0000033,1.07e-09,56;UBERON:0000078,6.94e-09,2;UBERON:0007497,6.94e-09,2;UBERON:0003643,6.94e-09,2;UBERON:0003504,6.94e-09,2;UBERON:0003469,6.94e-09,2;UBERON:0003496,6.94e-09,2;UBERON:0002012,6.94e-09,2;UBERON:0008886,6.94e-09,2;UBERON:0007303,6.94e-09,2;UBERON:0002061,6.94e-09,2;UBERON:0005432,6.94e-09,2;UBERON:0004363,6.94e-09,2;UBERON:0003567,8.09e-09,2;UBERON:0003838,8.09e-09,2;UBERON:0003586,8.09e-09,2;UBERON:0005169,8.09e-09,2;UBERON:0002321,8.09e-09,2;UBERON:0005215,8.09e-09,2;UBERON:0002303,8.09e-09,2;UBERON:0002319,8.09e-09,2;UBERON:0003056,9.58e-09,61;UBERON:0000153,9.85e-09,62;UBERON:0007811,9.85e-09,62;UBERON:0003075,1.21e-08,82;UBERON:0007284,1.21e-08,82;UBERON:0002346,3.20e-08,86;UBERON:0001444,6.33e-08,49 | |||
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| ||
|short_description=p@chr2:66670833..66670853,+ | |||
}} | }} |
Latest revision as of 11:32, 29 July 2015
Short description: | p@chr2:66670833..66670853, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:66670833..66670853, + |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.05e-47 | 3 |
ciliated epithelial cell | 4.05e-47 | 3 |
multi-ciliated epithelial cell | 4.05e-47 | 3 |
non-pigmented ciliary epithelial cell | 4.05e-47 | 3 |
pigment cell (sensu Vertebrata) | 1.65e-16 | 1 |
iris pigment epithelial cell | 1.65e-16 | 1 |
smooth muscle cell of the pulmonary artery | 1.93e-16 | 1 |
columnar/cuboidal epithelial cell | 1.51e-09 | 27 |
mesangial cell | 8.09e-09 | 2 |
kidney interstitial cell | 8.09e-09 | 2 |
juxtaglomerular complex cell | 8.09e-09 | 2 |
renal interstitial pericyte | 8.09e-09 | 2 |
extraglomerular mesangial cell | 8.09e-09 | 2 |
neurecto-epithelial cell | 1.29e-07 | 20 |