FFCP PHASE1:Hg19::chr2:87034617..87034644,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:87034617..87034644,-
|short_description=p@chr2:87034617..87034644,-
|description=CAGE_peak_at_chr2:87034617..87034644,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:87034617..87034644,- | |||
|description=CAGE_peak_at_chr2:87034617..87034644,- | |||
|id=chr2:87034617..87034644,- | |||
|ontology_enrichment_celltype=CL:0000625!5.56e-16!11;CL:0000791!2.56e-10!18;CL:0000789!2.56e-10!18;CL:0002420!2.56e-10!18;CL:0002419!2.56e-10!18;CL:0000790!2.56e-10!18;CL:0000084!9.29e-08!25;CL:0000827!9.29e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000625;6.81e-27;11!CL:0000791;6.62e-22;18!CL:0000789;6.62e-22;18!CL:0002419;6.62e-22;18!CL:0000084;1.42e-15;25!CL:0000333;1.73e-15;5!CL:0002553;6.88e-10;1!CL:0002127;1.68e-09;1!CL:0000911;1.68e-09;1!CL:0000814;1.68e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.17e-27,11;CL:0000791,6.85e-22,18;CL:0000789,6.85e-22,18;CL:0002420,6.85e-22,18;CL:0002419,6.85e-22,18;CL:0000790,6.85e-22,18;CL:0000084,1.45e-15,25;CL:0000827,1.45e-15,25;CL:0002553,8.17e-10,1;CL:0002127,1.06e-09,1;CL:0000914,1.06e-09,1;CL:0000911,1.06e-09,1;CL:0000814,1.06e-09,1;CL:0002042,1.06e-09,1;CL:0002039,1.06e-09,1;CL:0002040,1.06e-09,1;CL:0002041,1.06e-09,1;CL:0000838,4.34e-07,52;CL:0000542,6.11e-07,53;CL:0000051,6.11e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.62e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.29e-13;6!DOID:0050619;6.88e-10;1!DOID:1357;6.88e-10;1!DOID:171;5.24e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.52e-13,6;DOID:0050619,7.50e-10,1;DOID:1357,7.50e-10,1;DOID:171,5.38e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002020!3.72e-20!34;UBERON:0003528!3.72e-20!34;UBERON:0001869!1.18e-19!32;UBERON:0001893!4.61e-18!34;UBERON:0001049!1.81e-17!57;UBERON:0005068!1.81e-17!57;UBERON:0006241!1.81e-17!57;UBERON:0007135!1.81e-17!57;UBERON:0002791!2.70e-17!33;UBERON:0001950!5.60e-16!20;UBERON:0002619!7.19e-16!22;UBERON:0002616!2.61e-15!59;UBERON:0002780!2.71e-15!41;UBERON:0001890!2.71e-15!41;UBERON:0006240!2.71e-15!41;UBERON:0000956!7.78e-15!25;UBERON:0000203!7.78e-15!25;UBERON:0003080!9.56e-15!42;UBERON:0000955!2.52e-13!69;UBERON:0006238!2.52e-13!69;UBERON:0003075!4.91e-13!86;UBERON:0007284!4.91e-13!86;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0003056!2.52e-12!61;UBERON:0001017!4.31e-12!82;UBERON:0000153!5.69e-12!129;UBERON:0007811!5.69e-12!129;UBERON:0002346!5.83e-12!90;UBERON:0005743!8.58e-12!86;UBERON:0007023!2.28e-10!115;UBERON:0000033!2.58e-09!123;UBERON:0000974!2.93e-08!10;UBERON:0000200!3.61e-08!6;UBERON:0000064!6.61e-08!219;UBERON:0004121!5.65e-07!169;UBERON:0002308!8.48e-07!9;UBERON:0000125!8.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.84e-18;2!UBERON:0005058;4.84e-18;2!UBERON:0009113;4.84e-18;2!UBERON:0000013;1.73e-15;5!UBERON:0002410;1.73e-15;5!UBERON:0001764;6.88e-10;1!UBERON:0001825;6.88e-10;1!UBERON:0000010;7.64e-09;8!UBERON:0004177;9.43e-08;5!UBERON:0005057;9.43e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.46e-20,4;UBERON:0005058,9.46e-20,4;UBERON:0009113,9.46e-20,4;UBERON:0003295,9.46e-20,4;UBERON:0005562,9.46e-20,4;UBERON:0000013,1.82e-15,5;UBERON:0002410,1.82e-15,5;UBERON:0003351,2.31e-13,6;UBERON:0004177,1.57e-11,7;UBERON:0005057,1.57e-11,7;UBERON:0001764,7.50e-10,1;UBERON:0001825,7.50e-10,1;UBERON:0000010,7.86e-09,8;UBERON:0000974,3.22e-08,10;UBERON:0003408,3.22e-08,10;UBERON:0001042,3.22e-08,10;UBERON:0009145,3.22e-08,10;UBERON:0006562,1.64e-07,11;UBERON:0009722,1.64e-07,11;UBERON:0007690,1.64e-07,11;UBERON:0004807,1.85e-07,28 | |||
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| ||
|short_description=p@chr2:87034617..87034644,- | |||
}} | }} |
Latest revision as of 12:54, 29 July 2015
Short description: | p@chr2:87034617..87034644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:87034617..87034644, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.17e-27 | 11 |
mature alpha-beta T cell | 6.85e-22 | 18 |
alpha-beta T cell | 6.85e-22 | 18 |
immature T cell | 6.85e-22 | 18 |
mature T cell | 6.85e-22 | 18 |
immature alpha-beta T cell | 6.85e-22 | 18 |
T cell | 1.45e-15 | 25 |
pro-T cell | 1.45e-15 | 25 |
lung fibroblast | 8.17e-10 | 1 |
innate effector T cell | 1.06e-09 | 1 |
immature NK T cell | 1.06e-09 | 1 |
effector T cell | 1.06e-09 | 1 |
mature NK T cell | 1.06e-09 | 1 |
immature NK T cell stage IV | 1.06e-09 | 1 |
immature NK T cell stage I | 1.06e-09 | 1 |
immature NK T cell stage II | 1.06e-09 | 1 |
immature NK T cell stage III | 1.06e-09 | 1 |
lymphoid lineage restricted progenitor cell | 4.34e-07 | 52 |
lymphocyte | 6.11e-07 | 53 |
common lymphoid progenitor | 6.11e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 9.46e-20 | 4 |
hemolymphoid system gland | 9.46e-20 | 4 |
thymic region | 9.46e-20 | 4 |
pharyngeal gland | 9.46e-20 | 4 |
thymus primordium | 9.46e-20 | 4 |
sympathetic nervous system | 1.82e-15 | 5 |
autonomic nervous system | 1.82e-15 | 5 |
pharyngeal epithelium | 2.31e-13 | 6 |
hemopoietic organ | 1.57e-11 | 7 |
immune organ | 1.57e-11 | 7 |
maxillary sinus | 7.50e-10 | 1 |
paranasal sinus | 7.50e-10 | 1 |
peripheral nervous system | 7.86e-09 | 8 |
neck | 3.22e-08 | 10 |
gland of gut | 3.22e-08 | 10 |
chordate pharynx | 3.22e-08 | 10 |
pharyngeal region of foregut | 3.22e-08 | 10 |
pharynx | 1.64e-07 | 11 |
entire pharyngeal arch endoderm | 1.64e-07 | 11 |
early pharyngeal endoderm | 1.64e-07 | 11 |
respiratory system epithelium | 1.85e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.52e-13 | 6 |
paranasal sinus cancer | 7.50e-10 | 1 |
maxillary sinus cancer | 7.50e-10 | 1 |
neuroectodermal tumor | 5.38e-08 | 10 |