FFCP PHASE1:Hg19::chr2:89157058..89157093,-: Difference between revisions
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|id=chr2:89157058..89157093,-
|short_description=p1@AJ294735
|description=CAGE_peak_1_at_AJ294735_5end
|association_with_transcript=100bp_to_AJ294735_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_AJ294735_5end | |||
|cluster_id=chr2:89157058..89157093,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_1_at_AJ294735_5end | |||
|id=chr2:89157058..89157093,- | |||
|ontology_enrichment_celltype=CL:0000236!9.35e-20!14;CL:0000945!1.67e-17!24;CL:0000826!1.67e-17!24;CL:0000738!5.11e-16!140;CL:0002087!4.63e-14!119;CL:0000037!1.62e-11!172;CL:0000566!1.62e-11!172;CL:0002031!1.13e-10!124;CL:0000988!4.20e-10!182;CL:0002032!1.03e-08!165;CL:0000837!1.03e-08!165;CL:0000838!1.66e-08!52;CL:0000542!3.09e-08!53;CL:0000051!3.09e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.04e-28;24!CL:0000236;1.74e-28;13!CL:0000542;3.66e-10;53!CL:0000784;1.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.04e-31,14;CL:0000945,1.06e-28,24;CL:0000826,1.06e-28,24;CL:0000838,1.97e-13,52;CL:0000542,4.40e-13,53;CL:0000051,4.40e-13,53;CL:0002087,4.75e-08,115;CL:0000784,1.14e-07,3;CL:0000738,3.34e-07,136;CL:0002031,9.44e-07,120;CL:0000785,9.73e-07,2;CL:0000955,9.73e-07,2;CL:0000818,9.73e-07,2;CL:0000954,9.73e-07,2;CL:0000816,9.73e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.66e-10;53!CL:0000954;9.73e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.41e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.38e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.49e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-37!115;UBERON:0000178!3.06e-12!15;UBERON:0000179!3.06e-12!15;UBERON:0000463!3.06e-12!15;UBERON:0002390!6.80e-10!102;UBERON:0003061!6.80e-10!102;UBERON:0002193!9.75e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.31e-07;114!UBERON:0000178;3.47e-07;15!UBERON:0000179;3.47e-07;15!UBERON:0000463;3.47e-07;15!UBERON:0001829;7.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.07e-30,114;UBERON:0000178,3.55e-07,15;UBERON:0000179,3.55e-07,15;UBERON:0000463,3.55e-07,15;UBERON:0001829,7.01e-07,2 | |||
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| ||
|short_description=p1@AJ294735 | |||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p1@AJ294735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AJ294735_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 100bp_to_AJ294735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.04e-31 | 14 |
lymphocyte of B lineage | 1.06e-28 | 24 |
pro-B cell | 1.06e-28 | 24 |
lymphoid lineage restricted progenitor cell | 1.97e-13 | 52 |
lymphocyte | 4.40e-13 | 53 |
common lymphoid progenitor | 4.40e-13 | 53 |
nongranular leukocyte | 4.75e-08 | 115 |
plasmacytoid dendritic cell | 1.14e-07 | 3 |
leukocyte | 3.34e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 9.44e-07 | 120 |
mature B cell | 9.73e-07 | 2 |
pre-B-II cell | 9.73e-07 | 2 |
transitional stage B cell | 9.73e-07 | 2 |
small pre-B-II cell | 9.73e-07 | 2 |
immature B cell | 9.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.07e-30 | 114 |
blood | 3.55e-07 | 15 |
haemolymphatic fluid | 3.55e-07 | 15 |
organism substance | 3.55e-07 | 15 |
major salivary gland | 7.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.49e-08 | 10 |