FFCP PHASE1:Hg19::chr2:89165738..89165741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000430694,uc002stj.1_5end | |association_with_transcript=-85bp_to_ENST00000430694,uc002stj.1_5end | ||
|cluster_id=chr2:89165738..89165741,- | |||
|coexpression_cluster_id=C1508 | |coexpression_cluster_id=C1508 | ||
|description=CAGE_peak_7_at_ENST00000430694_5end,CAGE_peak_7_at_uc002stj.1_5end | |description=CAGE_peak_7_at_ENST00000430694_5end,CAGE_peak_7_at_uc002stj.1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!4.32e-31!14;CL:0000945!5.89e-24!24;CL:0000826!5.89e-24!24;CL:0000838!7.27e-15!52;CL:0000542!1.65e-14!53;CL:0000051!1.65e-14!53;CL:0000784!1.02e-12!3 | |ontology_enrichment_celltype=CL:0000236!4.32e-31!14;CL:0000945!5.89e-24!24;CL:0000826!5.89e-24!24;CL:0000838!7.27e-15!52;CL:0000542!1.65e-14!53;CL:0000051!1.65e-14!53;CL:0000784!1.02e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.49e-80;13!CL:0000945;1.84e-53;24!CL:0000784;3.86e-41;3!CL:0000542;1.23e-27;53!CL:0000785;2.75e-14;1!CL:0000819;2.75e-14;1!CL:0000451;1.02e-11;10!CL:0000738;1.77e-07;136 | |ontology_enrichment_celltype_v019=CL:0000236;1.49e-80;13!CL:0000945;1.84e-53;24!CL:0000784;3.86e-41;3!CL:0000542;1.23e-27;53!CL:0000785;2.75e-14;1!CL:0000819;2.75e-14;1!CL:0000451;1.02e-11;10!CL:0000738;1.77e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,8.53e-75,14;CL:0000945,1.74e-53,24;CL:0000826,1.74e-53,24;CL:0000784,3.86e-41,3;CL:0000838,4.76e-35,52;CL:0000542,2.30e-34,53;CL:0000051,2.30e-34,53;CL:0000738,2.98e-20,136;CL:0002087,8.56e-18,115;CL:0002031,5.33e-17,120;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0000819,2.41e-14,1;CL:0002032,2.53e-12,161;CL:0000837,2.53e-12,161;CL:0000451,1.02e-11,10;CL:0000785,8.04e-08,2;CL:0000955,8.04e-08,2;CL:0000818,8.04e-08,2;CL:0000954,8.04e-08,2;CL:0000816,8.04e-08,2;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-27;53!CL:0000954;8.60e-08;2 | |ontology_enrichment_development_v019=CL:0000051;1.23e-27;53!CL:0000954;8.60e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.75e-14;1!DOID:8675;2.75e-14;1!DOID:0060058;1.55e-12;10 | |ontology_enrichment_disease_v019=DOID:0060073;2.75e-14;1!DOID:8675;2.75e-14;1!DOID:0060058;1.55e-12;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.41e-14,1;DOID:8675,2.41e-14,1;DOID:0060058,1.49e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-11!115 | |ontology_enrichment_uberon=UBERON:0007023!3.01e-11!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@ENST00000430694,p7@uc002stj.1 | |short_description=p7@ENST00000430694,p7@uc002stj.1 | ||
}} | }} |
Latest revision as of 13:06, 29 July 2015
Short description: | p7@ENST00000430694, p7@uc002stj.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ENST00000430694_5end, CAGE_peak_7_at_uc002stj.1_5end |
Coexpression cluster: | C1508_Dendritic_adult_lymphangiectasia_hairy_CD19_lymphoma_diffuse |
Association with transcript: | -85bp_to_ENST00000430694, uc002stj.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 8.53e-75 | 14 |
lymphocyte of B lineage | 1.74e-53 | 24 |
pro-B cell | 1.74e-53 | 24 |
plasmacytoid dendritic cell | 3.86e-41 | 3 |
lymphoid lineage restricted progenitor cell | 4.76e-35 | 52 |
lymphocyte | 2.30e-34 | 53 |
common lymphoid progenitor | 2.30e-34 | 53 |
leukocyte | 2.98e-20 | 136 |
nongranular leukocyte | 8.56e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.33e-17 | 120 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
B-1 B cell | 2.41e-14 | 1 |
hematopoietic oligopotent progenitor cell | 2.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-12 | 161 |
dendritic cell | 1.02e-11 | 10 |
mature B cell | 8.04e-08 | 2 |
pre-B-II cell | 8.04e-08 | 2 |
transitional stage B cell | 8.04e-08 | 2 |
small pre-B-II cell | 8.04e-08 | 2 |
immature B cell | 8.04e-08 | 2 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.41e-14 | 1 |
lymphosarcoma | 2.41e-14 | 1 |
lymphoma | 1.49e-12 | 10 |