FFCP PHASE1:Hg19::chr3:129023260..129023267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-263bp_to_AF035296_5end | |association_with_transcript=-263bp_to_AF035296_5end | ||
|cluster_id=chr3:129023260..129023267,+ | |||
|coexpression_cluster_id=C889 | |coexpression_cluster_id=C889 | ||
|description=CAGE_peak_3_at_AF035296_5end | |description=CAGE_peak_3_at_AF035296_5end | ||
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|ontology_enrichment_celltype=CL:0002615!1.58e-08!3;CL:0002579!5.85e-08!3;CL:0002334!2.04e-07!12;CL:0002581!3.32e-07!1;CL:0002616!3.95e-07!1;CL:0002557!5.89e-07!1 | |ontology_enrichment_celltype=CL:0002615!1.58e-08!3;CL:0002579!5.85e-08!3;CL:0002334!2.04e-07!12;CL:0002581!3.32e-07!1;CL:0002616!3.95e-07!1;CL:0002557!5.89e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002581;2.21e-40;1!CL:0002097;3.44e-21;2!CL:0000174;1.31e-14;3!CL:0002615;1.83e-14;3!CL:0000077;1.99e-09;19!CL:0002537;3.22e-09;5 | |ontology_enrichment_celltype_v019=CL:0002581;2.21e-40;1!CL:0002097;3.44e-21;2!CL:0000174;1.31e-14;3!CL:0002615;1.83e-14;3!CL:0000077;1.99e-09;19!CL:0002537;3.22e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.48e-40,1;CL:0002097,3.81e-21,2;CL:0000174,1.40e-14,3;CL:0002615,2.09e-14,3;CL:0000077,1.99e-09,19;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:170;5.73e-08;6 | |ontology_enrichment_disease_v019=DOID:170;5.73e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003688!8.35e-15!6;UBERON:0002358!8.35e-15!6;UBERON:0003684!8.35e-15!6;UBERON:0001178!8.35e-15!6;UBERON:0005406!1.15e-12!2;UBERON:0004457!4.30e-11!12;UBERON:0000042!4.30e-11!12 | |ontology_enrichment_uberon=UBERON:0003688!8.35e-15!6;UBERON:0002358!8.35e-15!6;UBERON:0003684!8.35e-15!6;UBERON:0001178!8.35e-15!6;UBERON:0005406!1.15e-12!2;UBERON:0004457!4.30e-11!12;UBERON:0000042!4.30e-11!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;5.69e-21;2!UBERON:0002369;1.31e-14;3!UBERON:0001235;1.31e-14;3!UBERON:0006858;1.31e-14;3!UBERON:0003688;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6!UBERON:0000305;6.04e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0005406;5.69e-21;2!UBERON:0002369;1.31e-14;3!UBERON:0001235;1.31e-14;3!UBERON:0006858;1.31e-14;3!UBERON:0003688;6.78e-08;6!UBERON:0002358;6.78e-08;6!UBERON:0003684;6.78e-08;6!UBERON:0001178;6.78e-08;6!UBERON:0000305;6.04e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,4.66e-21,2;UBERON:0002369,1.40e-14,3;UBERON:0001235,1.40e-14,3;UBERON:0006858,1.40e-14,3;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0000305,6.04e-07,7 | |||
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|short_description=p3@AF035296 | |short_description=p3@AF035296 | ||
}} | }} |
Latest revision as of 15:40, 29 July 2015
Short description: | p3@AF035296 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AF035296_5end |
Coexpression cluster: | C889_mesothelioma_mesodermal_lung_placenta_umbilical_Urothelial_Mallassezderived |
Association with transcript: | -263bp_to_AF035296_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.48e-40 | 1 |
cortical cell of adrenal gland | 3.81e-21 | 2 |
steroid hormone secreting cell | 1.40e-14 | 3 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
mesothelial cell | 1.99e-09 | 19 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 4.66e-21 | 2 |
adrenal gland | 1.40e-14 | 3 |
adrenal cortex | 1.40e-14 | 3 |
adrenal/interrenal gland | 1.40e-14 | 3 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
amnion | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 5.92e-08 | 6 |