FFCP PHASE1:Hg19::chr3:141088551..141088556,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:141088551..141088556,+ | |||
|description=CAGE_peak_at_chr3:141088551..141088556,+ | |||
|id=chr3:141088551..141088556,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.52e-08!32;CL:1000306!2.96e-08!4;CL:0002547!2.96e-08!4;CL:0002195!7.70e-08!2;CL:0002571!7.70e-08!2;CL:0000569!8.04e-08!4;CL:0000011!8.04e-08!4;CL:0002588!1.83e-07!2;CL:0000192!2.51e-07!42;CL:0000514!2.51e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002540;1.38e-17;6!CL:0002092;5.83e-11;10!CL:1000306;1.75e-07;4!CL:0002547;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.12e-17,6;CL:0002092,5.15e-11,10;CL:1000306,2.04e-07,4;CL:0002547,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.58e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.47e-09;3!DOID:2394;4.41e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.41e-09,3;DOID:2394,4.19e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!8.76e-11!84;UBERON:0001009!1.19e-09!113;UBERON:0001981!4.53e-09!60;UBERON:0007500!4.53e-09!60;UBERON:0004537!4.53e-09!60;UBERON:0006965!4.53e-09!60;UBERON:0004535!5.32e-09!110;UBERON:0001637!5.37e-09!42;UBERON:0003509!5.37e-09!42;UBERON:0004572!5.37e-09!42;UBERON:0000415!2.96e-08!4;UBERON:0007240!2.96e-08!4;UBERON:0005742!2.96e-08!4;UBERON:0005734!2.96e-08!4;UBERON:0004664!2.96e-08!4;UBERON:0004663!2.96e-08!4;UBERON:0000055!1.88e-07!69;UBERON:0003914!3.06e-07!118;UBERON:0004573!8.94e-07!33;UBERON:0004571!8.94e-07!33;UBERON:0002118!9.29e-07!5;UBERON:0004532!9.29e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;7.73e-21;5!UBERON:0002371;2.71e-09;12!UBERON:0000992;1.24e-08;13!UBERON:0004797;1.75e-07;4!UBERON:0000415;1.75e-07;4!UBERON:0007240;1.75e-07;4!UBERON:0005742;1.75e-07;4!UBERON:0005734;1.75e-07;4!UBERON:0004664;1.75e-07;4!UBERON:0004663;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,6.65e-21,5;UBERON:0000992,1.17e-08,13;UBERON:0000415,2.04e-07,4;UBERON:0007240,2.04e-07,4;UBERON:0005742,2.04e-07,4;UBERON:0005734,2.04e-07,4;UBERON:0004664,2.04e-07,4;UBERON:0004663,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0.845302752556,0,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0.355123450626254,0.739144404124282,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.95460974377781,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0.281695602532241,0.430234056612155,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,1.25501137532991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,1.22538230705385,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,4.92447813715232,0.754703705257725,1.77962244319307,0,0.302461847526478,0.466311601748341,0.147855149989634,0.477890301491107,0,0,0,0.265841714557995,0,0.150257608997218,0,1.62748293281865,2.00033525122815,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:141088551..141088556,+ | |||
}} |
Latest revision as of 16:24, 29 July 2015
Short description: | p@chr3:141088551..141088556, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:141088551..141088556, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.12e-17 | 6 |
bone marrow cell | 5.15e-11 | 10 |
fibroblast of tunica adventitia of artery | 2.04e-07 | 4 |
fibroblast of the aortic adventitia | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
right ovary | 6.65e-21 | 5 |
female gonad | 1.17e-08 | 13 |
artery wall | 2.04e-07 | 4 |
tunica adventitia of artery | 2.04e-07 | 4 |
adventitia | 2.04e-07 | 4 |
tunica adventitia of blood vessel | 2.04e-07 | 4 |
aorta tunica adventitia | 2.04e-07 | 4 |
aorta wall | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.41e-09 | 3 |
ovarian cancer | 4.19e-08 | 14 |