FFCP PHASE1:Hg19::chr3:170458920..170458937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170458920..170458937,- | |||
|coexpression_cluster_id=C1486 | |coexpression_cluster_id=C1486 | ||
|description=CAGE_peak_at_chr3:170458920..170458937,- | |description=CAGE_peak_at_chr3:170458920..170458937,- | ||
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|ontology_enrichment_celltype=CL:0000055!3.42e-19!180;CL:0000057!1.61e-14!75;CL:0002620!2.56e-13!23;CL:0000188!9.57e-08!9;CL:0000680!3.46e-07!57;CL:0000056!3.46e-07!57;CL:0000355!3.46e-07!57;CL:0002622!4.70e-07!3;CL:0000594!9.11e-07!3 | |ontology_enrichment_celltype=CL:0000055!3.42e-19!180;CL:0000057!1.61e-14!75;CL:0002620!2.56e-13!23;CL:0000188!9.57e-08!9;CL:0000680!3.46e-07!57;CL:0000056!3.46e-07!57;CL:0000355!3.46e-07!57;CL:0002622!4.70e-07!3;CL:0000594!9.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002574;3.25e-19;1!CL:0002559;1.88e-15;5!CL:0002554;2.72e-10;2!CL:0002561;2.72e-10;2!CL:0000346;2.05e-07;3!CL:1000428;2.05e-07;3!CL:0002582;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0002574;3.25e-19;1!CL:0002559;1.88e-15;5!CL:0002554;2.72e-10;2!CL:0002561;2.72e-10;2!CL:0000346;2.05e-07;3!CL:1000428;2.05e-07;3!CL:0002582;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002574,3.25e-19,1;CL:0002559,1.62e-15,5;CL:0002561,2.27e-10,2;CL:0002554,2.49e-10,2;CL:0000346,2.05e-07,3;CL:1000428,2.05e-07,3;CL:0002582,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.04e-08;10 | |ontology_enrichment_development_v019=UBERON:0005795;4.04e-08;10 | ||
|ontology_enrichment_disease=DOID:0060084!1.88e-08!3;DOID:127!1.88e-08!3 | |ontology_enrichment_disease=DOID:0060084!1.88e-08!3;DOID:127!1.88e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;8.94e-25;3!DOID:127;8.94e-25;3!DOID:0060072;7.41e-19;4 | |ontology_enrichment_disease_v019=DOID:0060084;8.94e-25;3!DOID:127;8.94e-25;3!DOID:0060072;7.41e-19;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.95e-25,3;DOID:127,8.95e-25,3;DOID:0060072,7.41e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.03e-08!45;UBERON:0002416!1.03e-08!45;UBERON:0004290!1.21e-08!70;UBERON:0002097!1.15e-07!40;UBERON:0000486!2.07e-07!82;UBERON:0000914!2.80e-07!83;UBERON:0002329!2.80e-07!83;UBERON:0003077!2.80e-07!83;UBERON:0003059!2.80e-07!83;UBERON:0007282!2.80e-07!83;UBERON:0009618!2.80e-07!83;UBERON:0007285!2.80e-07!83 | |ontology_enrichment_uberon=UBERON:0002199!1.03e-08!45;UBERON:0002416!1.03e-08!45;UBERON:0004290!1.21e-08!70;UBERON:0002097!1.15e-07!40;UBERON:0000486!2.07e-07!82;UBERON:0000914!2.80e-07!83;UBERON:0002329!2.80e-07!83;UBERON:0003077!2.80e-07!83;UBERON:0003059!2.80e-07!83;UBERON:0007282!2.80e-07!83;UBERON:0009618!2.80e-07!83;UBERON:0007285!2.80e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.88e-15;5!UBERON:0005933;2.72e-10;2!UBERON:0005942;2.72e-10;2!UBERON:0005932;2.72e-10;2!UBERON:0000412;2.05e-07;3!UBERON:0001992;2.05e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002073;1.88e-15;5!UBERON:0005933;2.72e-10;2!UBERON:0005942;2.72e-10;2!UBERON:0005932;2.72e-10;2!UBERON:0000412;2.05e-07;3!UBERON:0001992;2.05e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,1.62e-15,5;UBERON:0005086,1.62e-15,5;UBERON:0005933,2.27e-10,2;UBERON:0005942,2.27e-10,2;UBERON:0005932,2.27e-10,2;UBERON:0000412,2.05e-07,3;UBERON:0001992,2.05e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67973248716669,0.860509862246441,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.847727604638247,0,0.618315175430633,0.257640540045629,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0.80823028409406,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,4.69348596989448,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21637060255316,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,1.14978018419333,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0,0,0,0,0,0.243713489631284,0,0.682499557039929,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0.378806010550178,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.521988583930423,0.453411851024545,0,0,2.14906609297785,0,0,0.530067437837643,0,0,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67973248716669,0.860509862246441,0,0.560677600142307,0,0,0.311211035399766,0,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0.910161361938026,1.43723628363248,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0.847727604638247,0,0.618315175430633,0.257640540045629,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0.80823028409406,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,4.69348596989448,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21637060255316,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,1.14978018419333,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.107420244868274,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0,0,0,0,0,0.243713489631284,0,0.682499557039929,0.707027159768564,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0.378806010550178,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.521988583930423,0.453411851024545,0,0,2.14906609297785,0,0,0.530067437837643,0,0,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:170458920..170458937,- | |short_description=p@chr3:170458920..170458937,- | ||
}} | }} |
Latest revision as of 18:12, 29 July 2015
Short description: | p@chr3:170458920..170458937, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170458920..170458937, - |
Coexpression cluster: | C1486_Fibroblast_Mesenchymal_Hair_mesenchymal_Preadipocyte_Smooth_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 3.25e-19 | 1 |
hair follicle cell | 1.62e-15 | 5 |
outer root sheath cell | 2.27e-10 | 2 |
fibroblast of lymphatic vessel | 2.49e-10 | 2 |
hair follicle dermal papilla cell | 2.05e-07 | 3 |
stem cell of epidermis | 2.05e-07 | 3 |
visceral preadipocyte | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 1.62e-15 | 5 |
hair follicle placode | 1.62e-15 | 5 |
hair root sheath | 2.27e-10 | 2 |
hair outer root sheath | 2.27e-10 | 2 |
bulb of hair follicle | 2.27e-10 | 2 |
dermal papilla | 2.05e-07 | 3 |
papillary layer of dermis | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.95e-25 | 3 |
leiomyoma | 8.95e-25 | 3 |
benign neoplasm | 7.41e-19 | 4 |