FFCP PHASE1:Hg19::chr3:178791955..178791978,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:178791955..178791978,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr3:178791955..178791978,- | |||
|id=chr3:178791955..178791978,- | |||
|ontology_enrichment_celltype=CL:0000148!6.36e-15!10;CL:0000541!6.36e-15!10;CL:0000945!1.91e-13!24;CL:0000826!1.91e-13!24;CL:0002322!2.43e-13!5;CL:0000147!1.74e-10!14;CL:0000785!1.49e-09!2;CL:0000955!1.49e-09!2;CL:0000818!1.49e-09!2;CL:0000954!1.49e-09!2;CL:0000816!1.49e-09!2;CL:0000710!1.64e-09!20;CL:0000453!1.79e-08!5;CL:0000990!7.11e-08!8;CL:0000075!8.33e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.67e-09;24!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.67e-09,24;CL:0000826,2.67e-09,24;CL:0000150,8.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.36e-16!10;DOID:2531!2.00e-08!51;DOID:0060083!2.00e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:630;2.42e-50;1!DOID:0050177;2.42e-50;1!DOID:0050427;2.42e-50;1!DOID:0060058;8.54e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.42e-50,1;DOID:0050177,2.42e-50,1;DOID:0050427,2.42e-50,1;DOID:0060058,8.54e-21,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.76e-18;3!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.76e-18,3;UBERON:0004854,6.76e-18,3;UBERON:0009034,6.76e-18,3;UBERON:0002095,6.76e-18,3;UBERON:0004782,6.76e-18,3;UBERON:0003281,6.76e-18,3;UBERON:0009664,6.76e-18,3;UBERON:0002296,6.76e-18,3;UBERON:0005602,6.76e-18,3;UBERON:0001179,6.76e-18,3;UBERON:0006293,6.76e-18,3;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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| ||
|short_description=p@chr3:178791955..178791978,- | |||
}} | }} | ||
Latest revision as of 18:27, 29 July 2015
| Short description: | p@chr3:178791955..178791978, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:178791955..178791978, - |
| Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 2.67e-09 | 24 |
| pro-B cell | 2.67e-09 | 24 |
| glandular epithelial cell | 8.37e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| spleen | 6.76e-18 | 3 |
| gastrointestinal system mesentery | 6.76e-18 | 3 |
| stomach region | 6.76e-18 | 3 |
| mesentery | 6.76e-18 | 3 |
| gastrointestinal system serosa | 6.76e-18 | 3 |
| mesentery of stomach | 6.76e-18 | 3 |
| gut mesentery | 6.76e-18 | 3 |
| dorsal mesentery | 6.76e-18 | 3 |
| dorsal mesogastrium | 6.76e-18 | 3 |
| peritoneal cavity | 6.76e-18 | 3 |
| spleen primordium | 6.76e-18 | 3 |
| hemopoietic organ | 1.89e-08 | 7 |
| immune organ | 1.89e-08 | 7 |
| stomach | 1.49e-07 | 8 |
| food storage organ | 1.49e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| genetic disease | 2.42e-50 | 1 |
| monogenic disease | 2.42e-50 | 1 |
| xeroderma pigmentosum | 2.42e-50 | 1 |
| lymphoma | 8.54e-21 | 10 |