FFCP PHASE1:Hg19::chr3:98516242..98516317,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:98516242..98516317,- | |||
|coexpression_cluster_id=C2763 | |||
|description=CAGE_peak_at_chr3:98516242..98516317,- | |||
|id=chr3:98516242..98516317,- | |||
|ontology_enrichment_celltype=CL:0002321!6.82e-17!248;CL:0000220!1.11e-16!246;CL:0000066!2.17e-14!254;CL:0000359!8.93e-11!32;CL:0000055!3.00e-10!180;CL:0000680!9.93e-10!57;CL:0000056!9.93e-10!57;CL:0000355!9.93e-10!57;CL:0000192!2.50e-09!42;CL:0000514!2.50e-09!42;CL:0000222!3.93e-09!119;CL:0000183!7.03e-09!59;CL:0000187!8.56e-09!54;CL:0000393!3.59e-08!60;CL:0000211!3.59e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.12e-13;32!CL:0000192;4.29e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.42e-13,32;CL:0000192,2.99e-10,43;CL:0000514,2.99e-10,43;CL:0000680,3.01e-09,58;CL:0000056,3.01e-09,58;CL:0000355,3.01e-09,58;CL:0002321,3.19e-09,250;CL:0000222,4.48e-09,121;CL:0000187,3.02e-08,55;CL:0000393,2.05e-07,61;CL:0000211,2.05e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.29e-07;43 | |||
|ontology_enrichment_disease=DOID:0050687!7.85e-14!143;DOID:14566!4.87e-10!239;DOID:162!1.12e-08!235;DOID:305!4.71e-08!106;DOID:193!8.04e-08!29;DOID:120!2.83e-07!27;DOID:2394!7.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.03e-11;14!DOID:193;2.57e-10;29!DOID:120;5.46e-10;27!DOID:1115;7.74e-08;20 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.42e-11,14;DOID:193,2.52e-10,29;DOID:120,5.63e-10,27;DOID:1115,6.58e-08,20;DOID:14566,1.80e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.63e-11!143;UBERON:0002100!4.51e-11!216;UBERON:0000119!1.41e-10!312;UBERON:0003104!1.81e-10!238;UBERON:0009142!1.81e-10!238;UBERON:0000483!2.74e-10!309;UBERON:0000486!4.70e-10!82;UBERON:0003914!6.48e-10!118;UBERON:0001637!9.43e-10!42;UBERON:0003509!9.43e-10!42;UBERON:0004572!9.43e-10!42;UBERON:0000481!1.14e-09!347;UBERON:0000490!1.25e-09!138;UBERON:0000475!1.28e-09!365;UBERON:0002049!2.03e-09!79;UBERON:0007798!2.03e-09!79;UBERON:0001134!3.57e-09!61;UBERON:0002036!3.57e-09!61;UBERON:0003082!3.57e-09!61;UBERON:0004290!4.87e-09!70;UBERON:0002385!1.06e-08!63;UBERON:0001015!1.06e-08!63;UBERON:0000383!1.06e-08!63;UBERON:0001981!2.79e-08!60;UBERON:0007500!2.79e-08!60;UBERON:0004537!2.79e-08!60;UBERON:0006965!2.79e-08!60;UBERON:0004573!6.84e-08!33;UBERON:0004571!6.84e-08!33;UBERON:0000914!7.57e-08!83;UBERON:0002329!7.57e-08!83;UBERON:0003077!7.57e-08!83;UBERON:0003059!7.57e-08!83;UBERON:0007282!7.57e-08!83;UBERON:0009618!7.57e-08!83;UBERON:0007285!7.57e-08!83;UBERON:0000055!2.02e-07!69;UBERON:0000467!5.64e-07!625;UBERON:0000468!7.21e-07!659;UBERON:0000480!7.92e-07!626;UBERON:0000922!9.72e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.77e-08;13!UBERON:0007625;3.84e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.27e-09,199;UBERON:0005256,1.07e-08,122;UBERON:0003104,1.78e-08,160;UBERON:0009142,1.78e-08,160;UBERON:0003914,1.95e-08,117;UBERON:0000992,2.32e-08,13;UBERON:0000486,3.62e-08,83;UBERON:0001134,3.70e-08,62;UBERON:0002036,3.70e-08,62;UBERON:0003082,3.70e-08,62;UBERON:0001637,6.06e-08,42;UBERON:0003509,6.06e-08,42;UBERON:0004572,6.06e-08,42;UBERON:0007503,6.67e-08,78;UBERON:0002385,1.13e-07,64;UBERON:0001015,1.13e-07,64;UBERON:0000383,1.13e-07,64;UBERON:0002329,2.32e-07,71;UBERON:0003059,2.32e-07,71;UBERON:0007282,2.32e-07,71;UBERON:0004290,2.32e-07,71;UBERON:0009618,2.32e-07,71;UBERON:0003077,3.73e-07,72;UBERON:0007285,3.73e-07,72;UBERON:0007625,5.22e-07,11;UBERON:0007524,5.93e-07,73 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0.263766978228454,0,0.331397375727916,3.36162573225888,1.20538905604795,2.19093027116212,3.90346239032406,0.246242116153576,0.204000691244253,0,0,2.87436292653057,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,3.40325341790644,5.98669373148923,5.27008714158756,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.550236083880135,0.417989933073621,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0,1.12264686313085,0.563057402416611,0,0,0.549605231791222,0,0,0,1.49091585508596,0.633152558322899,0.662045904066094,0.860509862246441,2.4826786753885,0.560677600142307,0,0,0.311211035399766,1.21239604862719,0.326923806226917,0.151357427644931,0.576175924479999,0,1.24864030732128,0,0.747243402759005,0.587172493218824,1.13311061057692,0.421352420106746,1.02077085627447,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0.919463387397059,1.50238058906597,0.567160915800105,0.358779271377724,0,0,0.600182192168805,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.757301322732344,0.184099797284599,0.161646056818812,1.42003837006646,0.201504196455281,0.169560592310488,2.31913023795956,1.36373060295417,1.43402297694502,0.243947412259191,0.662648841607426,0.580969714347592,0.310983165046111,0.252320850875628,1.45990943630332,0,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.661763836394364,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,1.02940686179115,0.439001141634502,0,1.10581869652794,0.0925884451585296,0.325808305310325,0,7.21656710126366,2.20267769452646,0.821860859650752,0,0.462985512576611,0.951270761172991,0,0,0.246217006087397,0,0,0,0.671928512795438,0.708875486211932,0.985143749731331,0.290633938513962,1.15014803749563,0.492663237895943,0.44024217006613,0.207328115540772,0.288239906833923,0,0.063497894292169,0,0,0,0.822619941626588,1.50171528921959,0.285826432630578,0.112131084345361,1.30788020649984,0.36669142910475,1.93907573636667,0,1.690605505112,0.26593811658487,1.04007436911366,0,1.41849132023278,1.5985330740966,0.285955987316295,0,0,0,0,0,4.52159065589379,2.61460037580088,6.89813639156194,0,0.502257091432126,0,0.239624855491583,0,9.98458335285029,2.60606352001643,3.90405012845728,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,1.08506009479894,0.623912584592421,0.892144943985809,0.157702415033935,1.17141414992713,0.601892199455438,0,0,0,1.29058417979192,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0,0.256278298511402,0.511707249066704,0.965123526861645,0,2.31314540703983,1.06537035187876,0.9033987161519,3.63478100428535,1.16210378459959,0.120859449591622,1.60405176242628,0.736647911487171,0.229628896329213,0.910455840033585,0.262248829918848,0,2.31046011313244,0,1.46139224653261,2.21658420675039,0,0.340187410553031,8.2048048118813,0,1.35473218771926,1.00337954770971,1.52925763827023,3.3243040357149,1.56712328305525,0,0,2.82095137628028,0.984043937099117,0,0,0.366277859273374,0,0,0.650060246036521,0,0.386682873168488,0.616194468458578,0.921022048356777,0.413509717453592,0.429680979473094,0.580066775656914,1.36362603865761,0,0.495854746082934,7.11103249250893,0,2.12431339796655,0.929691098594572,0.94443704049192,1.3940745403212,0.616067160352178,1.59691809095107,3.47973196830029,0.74129687641568,3.86437194203376,1.48863347743867,0.632758849437452,1.90630193923825,0,0.855877976067841,0,0,0.359744915166629,0.274537029736055,1.29593642580255,1.01091240786658,4.75530963519025,3.79132610615083,0,1.94970791705028,4.22600587027022,0.136499911407986,0.282810863907425,3.39024349860728,0,9.95158462861829,5.26141062304515,0,1.31178950409327,1.21746226177622,3.0982349809975,2.53526042279017,0.286822704408103,0.294747123039363,2.1400263088875,0.709522128141196,0.422215270595328,0,0,0,0.769776901804097,0.670302275535787,1.08890984861323,0,0,0,0.443430153536676,2.98640420269047,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,2.42721043499027,0,4.2620422020962,0,0,0.614321404198464,0,0.140669416410513,0.556543525114529,0,0.63337622438398,0.996239941255349,0.276283915531148,0.251932747854276,0.818149460017238,0,0.311039587661807,1.97710372524119,0,0,0,0,1.11136990144637,0,0,3.99227596002388,1.5625665665114,0.0874599999961957,0,0.455173793141999,1.77977555204936,0.7091630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| |||
|short_description=p@chr3:98516242..98516317,- | |||
}} |
Latest revision as of 00:06, 30 July 2015
Short description: | p@chr3:98516242..98516317, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98516242..98516317, - |
Coexpression cluster: | C2763_mucinous_glioblastoma_Myoblast_myxofibrosarcoma_fibrous_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.42e-13 | 32 |
smooth muscle cell | 2.99e-10 | 43 |
smooth muscle myoblast | 2.99e-10 | 43 |
muscle precursor cell | 3.01e-09 | 58 |
myoblast | 3.01e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.01e-09 | 58 |
embryonic cell | 3.19e-09 | 250 |
mesodermal cell | 4.48e-09 | 121 |
muscle cell | 3.02e-08 | 55 |
electrically responsive cell | 2.05e-07 | 61 |
electrically active cell | 2.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 9.27e-09 | 199 |
trunk mesenchyme | 1.07e-08 | 122 |
mesenchyme | 1.78e-08 | 160 |
entire embryonic mesenchyme | 1.78e-08 | 160 |
epithelial tube | 1.95e-08 | 117 |
female gonad | 2.32e-08 | 13 |
multilaminar epithelium | 3.62e-08 | 83 |
skeletal muscle tissue | 3.70e-08 | 62 |
striated muscle tissue | 3.70e-08 | 62 |
myotome | 3.70e-08 | 62 |
artery | 6.06e-08 | 42 |
arterial blood vessel | 6.06e-08 | 42 |
arterial system | 6.06e-08 | 42 |
epithelial vesicle | 6.67e-08 | 78 |
muscle tissue | 1.13e-07 | 64 |
musculature | 1.13e-07 | 64 |
musculature of body | 1.13e-07 | 64 |
somite | 2.32e-07 | 71 |
presomitic mesoderm | 2.32e-07 | 71 |
presumptive segmental plate | 2.32e-07 | 71 |
dermomyotome | 2.32e-07 | 71 |
trunk paraxial mesoderm | 2.32e-07 | 71 |
paraxial mesoderm | 3.73e-07 | 72 |
presumptive paraxial mesoderm | 3.73e-07 | 72 |
pigment epithelium of eye | 5.22e-07 | 11 |
dense mesenchyme tissue | 5.93e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.42e-11 | 14 |
reproductive organ cancer | 2.52e-10 | 29 |
female reproductive organ cancer | 5.63e-10 | 27 |
sarcoma | 6.58e-08 | 20 |
disease of cellular proliferation | 1.80e-07 | 239 |