FFCP PHASE1:Hg19::chr3:98516353..98516419,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98516353..98516419,- | |||
|coexpression_cluster_id=C2763 | |coexpression_cluster_id=C2763 | ||
|description=CAGE_peak_at_chr3:98516353..98516419,- | |description=CAGE_peak_at_chr3:98516353..98516419,- | ||
|id=chr3:98516353..98516419,- | |id=chr3:98516353..98516419,- | ||
|ontology_enrichment_celltype=CL:0002321!4.03e-16!248;CL:0000220!8.60e-16!246;CL:0000066!9.34e-13!254;CL:0000055!2.51e-11!180;CL:0000680!9.31e-09!57;CL:0000056!9.31e-09!57;CL:0000355!9.31e-09!57;CL:0000548!7.57e-08!679;CL:0000004!7.57e-08!679;CL:0000255!7.57e-08!679;CL:0000187!1.89e-07!54;CL:0000012!2.11e-07!682;CL:0000222!2.67e-07!119;CL:0000359!2.80e-07!32;CL:0000393!8.51e-07!60;CL:0000211!8.51e-07!60 | |ontology_enrichment_celltype=CL:0002321!4.03e-16!248;CL:0000220!8.60e-16!246;CL:0000066!9.34e-13!254;CL:0000055!2.51e-11!180;CL:0000680!9.31e-09!57;CL:0000056!9.31e-09!57;CL:0000355!9.31e-09!57;CL:0000548!7.57e-08!679;CL:0000004!7.57e-08!679;CL:0000255!7.57e-08!679;CL:0000187!1.89e-07!54;CL:0000012!2.11e-07!682;CL:0000222!2.67e-07!119;CL:0000359!2.80e-07!32;CL:0000393!8.51e-07!60;CL:0000211!8.51e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.01e-07,250;CL:0000515,9.68e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!5.31e-08!29;DOID:0050687!6.91e-08!143;DOID:120!9.09e-08!27;DOID:2394!2.62e-07!14;DOID:14566!8.65e-07!239 | |ontology_enrichment_disease=DOID:193!5.31e-08!29;DOID:0050687!6.91e-08!143;DOID:120!9.09e-08!27;DOID:2394!2.62e-07!14;DOID:14566!8.65e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:193;3.70e-11;29!DOID:120;6.29e-11;27!DOID:2394;1.96e-09;14!DOID:0060072;1.74e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:193,2.70e-11,29;DOID:120,4.27e-11,27;DOID:2394,1.47e-09,14;DOID:0060072,1.94e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.33e-12!216;UBERON:0005256!1.27e-11!143;UBERON:0000475!2.61e-11!365;UBERON:0003104!1.16e-10!238;UBERON:0009142!1.16e-10!238;UBERON:0000481!2.34e-09!347;UBERON:0000486!4.42e-09!82;UBERON:0000483!5.61e-09!309;UBERON:0000119!7.26e-09!312;UBERON:0000490!4.29e-08!138;UBERON:0007625!4.73e-08!11;UBERON:0000914!5.73e-08!83;UBERON:0002329!5.73e-08!83;UBERON:0003077!5.73e-08!83;UBERON:0003059!5.73e-08!83;UBERON:0007282!5.73e-08!83;UBERON:0009618!5.73e-08!83;UBERON:0007285!5.73e-08!83;UBERON:0003914!7.75e-08!118;UBERON:0000468!7.83e-08!659;UBERON:0001134!1.45e-07!61;UBERON:0002036!1.45e-07!61;UBERON:0003082!1.45e-07!61;UBERON:0000467!1.72e-07!625;UBERON:0000480!2.38e-07!626;UBERON:0002385!3.08e-07!63;UBERON:0001015!3.08e-07!63;UBERON:0000383!3.08e-07!63;UBERON:0001637!3.62e-07!42;UBERON:0003509!3.62e-07!42;UBERON:0004572!3.62e-07!42;UBERON:0004290!4.29e-07!70;UBERON:0000922!5.03e-07!612;UBERON:0001048!5.66e-07!168;UBERON:0003886!9.81e-07!63 | |ontology_enrichment_uberon=UBERON:0002100!1.33e-12!216;UBERON:0005256!1.27e-11!143;UBERON:0000475!2.61e-11!365;UBERON:0003104!1.16e-10!238;UBERON:0009142!1.16e-10!238;UBERON:0000481!2.34e-09!347;UBERON:0000486!4.42e-09!82;UBERON:0000483!5.61e-09!309;UBERON:0000119!7.26e-09!312;UBERON:0000490!4.29e-08!138;UBERON:0007625!4.73e-08!11;UBERON:0000914!5.73e-08!83;UBERON:0002329!5.73e-08!83;UBERON:0003077!5.73e-08!83;UBERON:0003059!5.73e-08!83;UBERON:0007282!5.73e-08!83;UBERON:0009618!5.73e-08!83;UBERON:0007285!5.73e-08!83;UBERON:0003914!7.75e-08!118;UBERON:0000468!7.83e-08!659;UBERON:0001134!1.45e-07!61;UBERON:0002036!1.45e-07!61;UBERON:0003082!1.45e-07!61;UBERON:0000467!1.72e-07!625;UBERON:0000480!2.38e-07!626;UBERON:0002385!3.08e-07!63;UBERON:0001015!3.08e-07!63;UBERON:0000383!3.08e-07!63;UBERON:0001637!3.62e-07!42;UBERON:0003509!3.62e-07!42;UBERON:0004572!3.62e-07!42;UBERON:0004290!4.29e-07!70;UBERON:0000922!5.03e-07!612;UBERON:0001048!5.66e-07!168;UBERON:0003886!9.81e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;6.69e-13;11!UBERON:0000488;1.42e-07;4!UBERON:0003134;2.45e-07;33!UBERON:0010371;5.06e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.79e-13,11;UBERON:0000488,1.34e-07,4;UBERON:0001637,2.28e-07,42;UBERON:0003509,2.28e-07,42;UBERON:0004572,2.28e-07,42;UBERON:0003134,8.28e-07,37;UBERON:0000474,8.28e-07,37 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,0,0.982935746006035,0,0,0,0,0.662794751455832,1.34465029290355,1.80808358407193,8.03341099426111,2.43966399395253,0.246242116153576,0.204000691244253,0,0.85870796139317,2.73748850145768,1.00434111675842,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,5.19941494402373,5.76496433402666,7.02678285545008,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.72131935057184,0.860509862246441,2.83734705758686,0,0,0.98667019366864,0,0.808264032418128,0.817309515567294,0.302714855289863,0,0,0.936480230490962,0,2.24173020827702,0.469737994575059,0.485618833104395,0.140450806702248,0.61246251376468,0.368502951935304,0,0,0,0,0,0.168336113954066,0.500474079487857,0,0.438977620880838,0.30648779579902,1.20190447125277,1.24775401476023,0.358779271377724,0,0.635795703478686,0.900273288253207,0.412210116953756,0,0.37223371266318,1.18143432568886,0.0974370051611986,0,0.276149695926898,0,1.06502877754984,0.302256294682921,0.508681776931463,2.12586938479627,0.545492241181669,2.86804595389004,0.365921118388786,0.662648841607426,0.232387885739037,0.725627385107593,0,0.36497735907583,0,0,0,0.464367928031979,1.44375896333917,0.118306800039844,0,0.482022059766964,0,0.435758888184812,0.71181185733329,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,2.57351715447788,0.98775256867763,0,1.20634766893957,0.648119116109707,0,0,4.3299402607582,4.86907700895323,1.17408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0.93733833986777,1.6798212819886,1.41775097242386,1.25381931783988,0.871901815541886,0,0.985326475791887,0.528290604079356,0,0,0.25248486685276,0.063497894292169,0,0,0,0.822619941626588,0.901029173531752,0.285826432630578,0.112131084345361,0,0.22001485746285,1.03417372606222,0,0.845302752556,0,0,0,1.41849132023278,0.266422179016099,0.857867961948885,0,0,1.62868092146868,0.355391948742546,0,5.12446941001296,3.48613383440118,6.49824442683371,0,0,0,0.479249710983165,0,2.85273810081437,3.76431397335706,3.28762116080613,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0.813795071099207,0.415941723061614,0.178428988797162,0.788512075169673,0.937131319941706,0.601892199455438,0,0,0,0.921845842708516,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.804269605718038,0,3.08419387605311,4.08391968220192,1.23190734020714,3.63478100428535,2.67283870457906,0,3.60911646545913,0.828728900423067,0.459257792658427,1.82091168006717,0.917870904715969,1.35359883872224,3.23464415838542,1.56869953835371,2.92278449306521,3.27210049567915,0,0,3.23873874153209,0,0.270946437543853,0.501689773854853,1.52925763827023,0.831076008928724,1.34324852833307,0,0,2.82095137628028,1.31205858279882,0.976135183992909,0,0,0,0,0,1.6068392984416,0.773365746336976,0.770243085573222,0.921022048356777,0.413509717453592,0.322260734604821,0.580066775656914,1.19317278382541,0.0890320356467374,2.14870389969272,1.72971060628596,0.382838137483752,1.4162089319777,0.464845549297286,2.20368642781448,1.3940745403212,0,1.06461206063404,0.869932992075073,1.29726953372744,1.00187420719394,0,0.632758849437452,0.953150969619124,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0.823611089208164,0.942499218765491,0.404364963146632,4.75530963519025,0.842516912477962,0,4.14312932373184,0,0,0.707027159768564,0,0,5.97095077717098,4.38450885253763,0,0,1.21746226177622,1.54911749049875,0.845086807596724,0.717056761020258,0.196498082026242,0.7133421029625,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.577332676353072,0,0,0,0.86101074534246,1.68471475667626,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0.849523652246594,0,3.40963376167696,0,0.296964680832639,0.614321404198464,0,0,0.667852230137435,0,0,0,0,0,1.63629892003448,0.123084805461069,0,2.60618218327248,0.179021174675609,0,0.394573622547734,0,1.11136990144637,0,0,0,0.7812832832557,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,0,0.549585560411174,0,0,0,0,0,0,0,0.189753732724185,0,5.27495161320068,3.10142335502381,0.282706142867882,0,0,0.176915129006678,0,0.296521128680622,0,0.104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|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,0,0.982935746006035,0,0,0,0,0.662794751455832,1.34465029290355,1.80808358407193,8.03341099426111,2.43966399395253,0.246242116153576,0.204000691244253,0,0.85870796139317,2.73748850145768,1.00434111675842,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,5.19941494402373,5.76496433402666,7.02678285545008,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.633152558322899,1.72131935057184,0.860509862246441,2.83734705758686,0,0,0.98667019366864,0,0.808264032418128,0.817309515567294,0.302714855289863,0,0,0.936480230490962,0,2.24173020827702,0.469737994575059,0.485618833104395,0.140450806702248,0.61246251376468,0.368502951935304,0,0,0,0,0,0.168336113954066,0.500474079487857,0,0.438977620880838,0.30648779579902,1.20190447125277,1.24775401476023,0.358779271377724,0,0.635795703478686,0.900273288253207,0.412210116953756,0,0.37223371266318,1.18143432568886,0.0974370051611986,0,0.276149695926898,0,1.06502877754984,0.302256294682921,0.508681776931463,2.12586938479627,0.545492241181669,2.86804595389004,0.365921118388786,0.662648841607426,0.232387885739037,0.725627385107593,0,0.36497735907583,0,0,0,0.464367928031979,1.44375896333917,0.118306800039844,0,0.482022059766964,0,0.435758888184812,0.71181185733329,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,2.57351715447788,0.98775256867763,0,1.20634766893957,0.648119116109707,0,0,4.3299402607582,4.86907700895323,1.17408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0.93733833986777,1.6798212819886,1.41775097242386,1.25381931783988,0.871901815541886,0,0.985326475791887,0.528290604079356,0,0,0.25248486685276,0.063497894292169,0,0,0,0.822619941626588,0.901029173531752,0.285826432630578,0.112131084345361,0,0.22001485746285,1.03417372606222,0,0.845302752556,0,0,0,1.41849132023278,0.266422179016099,0.857867961948885,0,0,1.62868092146868,0.355391948742546,0,5.12446941001296,3.48613383440118,6.49824442683371,0,0,0,0.479249710983165,0,2.85273810081437,3.76431397335706,3.28762116080613,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0.813795071099207,0.415941723061614,0.178428988797162,0.788512075169673,0.937131319941706,0.601892199455438,0,0,0,0.921845842708516,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.804269605718038,0,3.08419387605311,4.08391968220192,1.23190734020714,3.63478100428535,2.67283870457906,0,3.60911646545913,0.828728900423067,0.459257792658427,1.82091168006717,0.917870904715969,1.35359883872224,3.23464415838542,1.56869953835371,2.92278449306521,3.27210049567915,0,0,3.23873874153209,0,0.270946437543853,0.501689773854853,1.52925763827023,0.831076008928724,1.34324852833307,0,0,2.82095137628028,1.31205858279882,0.976135183992909,0,0,0,0,0,1.6068392984416,0.773365746336976,0.770243085573222,0.921022048356777,0.413509717453592,0.322260734604821,0.580066775656914,1.19317278382541,0.0890320356467374,2.14870389969272,1.72971060628596,0.382838137483752,1.4162089319777,0.464845549297286,2.20368642781448,1.3940745403212,0,1.06461206063404,0.869932992075073,1.29726953372744,1.00187420719394,0,0.632758849437452,0.953150969619124,0,0.42793898803392,0.636406495851874,0,0.359744915166629,0.823611089208164,0.942499218765491,0.404364963146632,4.75530963519025,0.842516912477962,0,4.14312932373184,0,0,0.707027159768564,0,0,5.97095077717098,4.38450885253763,0,0,1.21746226177622,1.54911749049875,0.845086807596724,0.717056761020258,0.196498082026242,0.7133421029625,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.577332676353072,0,0,0,0.86101074534246,1.68471475667626,0,2.29723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0.849523652246594,0,3.40963376167696,0,0.296964680832639,0.614321404198464,0,0,0.667852230137435,0,0,0,0,0,1.63629892003448,0.123084805461069,0,2.60618218327248,0.179021174675609,0,0.394573622547734,0,1.11136990144637,0,0,0,0.7812832832557,0.0874599999961957,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,0,0.549585560411174,0,0,0,0,0,0,0,0.189753732724185,0,5.27495161320068,3.10142335502381,0.282706142867882,0,0,0.176915129006678,0,0.296521128680622,0,0.104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| ||
|short_description=p@chr3:98516353..98516419,- | |short_description=p@chr3:98516353..98516419,- | ||
}} | }} |
Latest revision as of 00:06, 30 July 2015
Short description: | p@chr3:98516353..98516419, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98516353..98516419, - |
Coexpression cluster: | C2763_mucinous_glioblastoma_Myoblast_myxofibrosarcoma_fibrous_Smooth_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.01e-07 | 250 |
skeletal muscle myoblast | 9.68e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 9.79e-13 | 11 |
atypical epithelium | 1.34e-07 | 4 |
artery | 2.28e-07 | 42 |
arterial blood vessel | 2.28e-07 | 42 |
arterial system | 2.28e-07 | 42 |
female reproductive organ | 8.28e-07 | 37 |
female reproductive system | 8.28e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 2.70e-11 | 29 |
female reproductive organ cancer | 4.27e-11 | 27 |
ovarian cancer | 1.47e-09 | 14 |
benign neoplasm | 1.94e-07 | 4 |