FFCP PHASE1:Hg19::chr4:177302106..177302128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:177302106..177302128,+ | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr4:177302106..177302128,+ | |description=CAGE_peak_at_chr4:177302106..177302128,+ | ||
|id=chr4:177302106..177302128,+ | |id=chr4:177302106..177302128,+ | ||
|ontology_enrichment_celltype=CL:0002573!1.10e-09!2;CL:0000243!3.34e-09!15;CL:0000125!3.34e-09!15;CL:0000030!3.34e-09!15;CL:0000339!3.34e-09!15;CL:0000095!3.32e-08!17;CL:0000123!3.32e-08!17;CL:0000342!2.21e-07!1;CL:0002565!2.21e-07!1 | |ontology_enrichment_celltype=CL:0002573!1.10e-09!2;CL:0000243!3.34e-09!15;CL:0000125!3.34e-09!15;CL:0000030!3.34e-09!15;CL:0000339!3.34e-09!15;CL:0000095!3.32e-08!17;CL:0000123!3.32e-08!17;CL:0000342!2.21e-07!1;CL:0002565!2.21e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002573;8.37e-39;2!CL:0000243;3.53e-27;15!CL:0000125;3.53e-27;15!CL:0000095;2.17e-24;17!CL:0002319;2.38e-17;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,6.91e-39,2;CL:0000243,3.53e-27,15;CL:0000125,3.53e-27,15;CL:0000030,3.53e-27,15;CL:0000339,3.53e-27,15;CL:0000095,2.17e-24,17;CL:0000123,2.17e-24,17;CL:0002319,2.38e-17,25;CL:0000333,4.29e-11,41;CL:0000133,5.94e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000339;3.53e-27;15!UBERON:0006238;2.55e-11;10!UBERON:0007123;6.58e-07;5 | |||
|ontology_enrichment_disease=DOID:0060085!1.95e-07!1;DOID:3165!1.95e-07!1;DOID:0060121!1.95e-07!1;DOID:2438!1.95e-07!1;DOID:4418!1.95e-07!1;DOID:5662!2.35e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.14e-10;3!DOID:3093;1.85e-10;11!DOID:3908;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.09e-10,3;DOID:3093,1.94e-10,11;DOID:3908,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0006122!1.10e-07!1;UBERON:0002506!2.21e-07!1;UBERON:0001769!2.21e-07!1;UBERON:0006834!2.50e-07!1;UBERON:0002363!4.61e-07!1;UBERON:0007647!4.61e-07!1;UBERON:0010115!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;1.08e-13;8!UBERON:0002046;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.02e-13,8;UBERON:0002046,6.77e-07,5;UBERON:0004117,6.77e-07,5;UBERON:0007689,6.77e-07,5;UBERON:0007123,6.77e-07,5;UBERON:0003091,6.77e-07,5 | |||
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|short_description=p@chr4:177302106..177302128,+ | |short_description=p@chr4:177302106..177302128,+ | ||
}} | }} |
Latest revision as of 03:39, 30 July 2015
Short description: | p@chr4:177302106..177302128, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:177302106..177302128, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 6.91e-39 | 2 |
glial cell (sensu Vertebrata) | 3.53e-27 | 15 |
glial cell | 3.53e-27 | 15 |
glioblast | 3.53e-27 | 15 |
glioblast (sensu Vertebrata) | 3.53e-27 | 15 |
neuron associated cell | 2.17e-24 | 17 |
neuron associated cell (sensu Vertebrata) | 2.17e-24 | 17 |
neural cell | 2.38e-17 | 25 |
migratory neural crest cell | 4.29e-11 | 41 |
neurectodermal cell | 5.94e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.02e-13 | 8 |
thyroid gland | 6.77e-07 | 5 |
pharyngeal pouch | 6.77e-07 | 5 |
thyroid diverticulum | 6.77e-07 | 5 |
pharyngeal pouch 2 | 6.77e-07 | 5 |
thyroid primordium | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.09e-10 | 3 |
nervous system cancer | 1.94e-10 | 11 |
non-small cell lung carcinoma | 6.39e-07 | 5 |