FFCP PHASE1:Hg19::chr5:133451667..133451690,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:133451667..133451690,- | |||
|coexpression_cluster_id=C1952 | |coexpression_cluster_id=C1952 | ||
|description=CAGE_peak_at_chr5:133451667..133451690,- | |description=CAGE_peak_at_chr5:133451667..133451690,- | ||
|id=chr5:133451667..133451690,- | |id=chr5:133451667..133451690,- | ||
|ontology_enrichment_celltype=CL:0000084!1.47e-11!25;CL:0000827!1.47e-11!25;CL:0000542!9.09e-11!53;CL:0000051!9.09e-11!53;CL:0000838!2.73e-10!52;CL:0000791!1.52e-09!18;CL:0000789!1.52e-09!18;CL:0002420!1.52e-09!18;CL:0002419!1.52e-09!18;CL:0000790!1.52e-09!18;CL:0000625!9.53e-09!11 | |ontology_enrichment_celltype=CL:0000084!1.47e-11!25;CL:0000827!1.47e-11!25;CL:0000542!9.09e-11!53;CL:0000051!9.09e-11!53;CL:0000838!2.73e-10!52;CL:0000791!1.52e-09!18;CL:0000789!1.52e-09!18;CL:0002420!1.52e-09!18;CL:0002419!1.52e-09!18;CL:0000790!1.52e-09!18;CL:0000625!9.53e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.57e-27;25!CL:0000791;4.14e-21;18!CL:0000789;4.14e-21;18!CL:0002419;4.14e-21;18!CL:0000625;1.99e-14;11!CL:0000542;2.57e-13;53!CL:0000226;6.14e-11;3!CL:0000842;6.14e-11;3!CL:0000623;1.37e-10;3!CL:0000624;1.02e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.35e-27,25;CL:0000827,3.35e-27,25;CL:0000838,3.82e-26,52;CL:0000542,1.53e-25,53;CL:0000051,1.53e-25,53;CL:0000791,4.33e-21,18;CL:0000789,4.33e-21,18;CL:0002420,4.33e-21,18;CL:0002419,4.33e-21,18;CL:0000790,4.33e-21,18;CL:0000625,2.26e-14,11;CL:0002087,3.81e-13,115;CL:0000738,2.38e-12,136;CL:0000623,4.33e-11,3;CL:0000825,4.33e-11,3;CL:0000226,5.14e-11,3;CL:0000842,5.14e-11,3;CL:0000624,9.37e-10,6;CL:0002031,4.86e-09,120;CL:0000037,9.58e-09,168;CL:0000988,5.61e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.14e-21;18!CL:0000051;2.57e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!1.37e-08!15;UBERON:0000179!1.37e-08!15;UBERON:0000463!1.37e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.04e-17;15!UBERON:0000179;4.04e-17;15!UBERON:0000463;4.04e-17;15!UBERON:0002390;1.51e-09;32!UBERON:0002370;1.24e-08;2!UBERON:0005058;1.24e-08;2!UBERON:0009113;1.24e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.53e-17,15;UBERON:0000179,3.53e-17,15;UBERON:0000463,3.53e-17,15;UBERON:0003351,1.75e-09,6;UBERON:0002370,9.54e-09,4;UBERON:0005058,9.54e-09,4;UBERON:0009113,9.54e-09,4;UBERON:0003295,9.54e-09,4;UBERON:0005562,9.54e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,1.52826811495903,2.46301768349837,1.96776953284198,0,0,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,1.30206522429511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,3.73748563216283,3.14408610199332,3.08402248499264,0,0,0.473447805734733,5.84480185223734,0,0,0.221533894583621,0,0.128091319725675,0,2.46656856905514,0.829050053357545,0.289803085735052,2.66915813691709,1.60524496853828,4.18142095219907,0,1.53288197440768,1.37450978193052,1.77113784413652,0.637130828648193,0,1.90090408889675,0.903450714466637,0.255973222308837,1.24930726552346,2.60454977248419,2.46338399076314,3.42731463482045,1.06976078313403,3.47578569318718,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.597794722207204,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0.609868530647977,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,2.20731549707325,0.245976877086227,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,1.77327684181734,1.94064817373566,2.82354679815446,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,0,0.12269149171914,1.50051156317903,0,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0,2.06768026122887,1.72571360654893,2.45473382947922,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.887808626565635,0.492762936082855,1.03850885836724,0.929683027679674,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,1.09883357782012,0.41254749960294,0,0,0,0.386682873168488,0,0.15350367472613,0.137836572484531,0,0,0.255679882248303,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,3.0585488285695,1.70894156152249,1.42939065274673,2.05681136543097,0.648473311192717,0,4.75875105776562,0.106824071127473,0,0,0.371606350251437,0,3.55709216742071,1.59426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,1.42068073403207,0,0,0,0,0,0.333926115068718,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0,0,0.216388639742091,0.995261931078505,0,0,0,0.247127877893006,0,0.067401132980677,0,0,0,0,1.21390189767046,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0.397429223405979,0.0633107959558787,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.523014231561666,0.203996435272644,0,0,0.136905378891993,0,0,1.31443677139657,0,0,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,1.41809728153003,0.906574442192831,1.07845670166696,0.0984274815147488,0,0,0,0.160753148465019,0.275078873194468,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0.979762080328227,0,0,0,0.226624183040251,0,0,0,0.26446520348538,0.171086837884329,0.704815022316672,0.106787412567695,0,0.414239055347196,3.96932817449561,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.568209015825267,0,0,0,0.302461847526478,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0.327609848846413,0.491545817507439,0,0.19998739585493,0,0,0,1.10463570151104,0,0.622077260032973,0.127894371303652,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,1.5913297769302,0.150420656698515,0.60511520611056,1.56302802246618,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0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|short_description=p@chr5:133451667..133451690,- | |short_description=p@chr5:133451667..133451690,- | ||
}} | }} |
Latest revision as of 09:45, 30 July 2015
Short description: | p@chr5:133451667..133451690, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133451667..133451690, - |
Coexpression cluster: | C1952_thymus_Hodgkin_acute_CD8_CD4_Whole_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.35e-27 | 25 |
pro-T cell | 3.35e-27 | 25 |
lymphoid lineage restricted progenitor cell | 3.82e-26 | 52 |
lymphocyte | 1.53e-25 | 53 |
common lymphoid progenitor | 1.53e-25 | 53 |
mature alpha-beta T cell | 4.33e-21 | 18 |
alpha-beta T cell | 4.33e-21 | 18 |
immature T cell | 4.33e-21 | 18 |
mature T cell | 4.33e-21 | 18 |
immature alpha-beta T cell | 4.33e-21 | 18 |
CD8-positive, alpha-beta T cell | 2.26e-14 | 11 |
nongranular leukocyte | 3.81e-13 | 115 |
leukocyte | 2.38e-12 | 136 |
natural killer cell | 4.33e-11 | 3 |
pro-NK cell | 4.33e-11 | 3 |
single nucleate cell | 5.14e-11 | 3 |
mononuclear cell | 5.14e-11 | 3 |
CD4-positive, alpha-beta T cell | 9.37e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 4.86e-09 | 120 |
hematopoietic stem cell | 9.58e-09 | 168 |
hematopoietic cell | 5.61e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.53e-17 | 15 |
haemolymphatic fluid | 3.53e-17 | 15 |
organism substance | 3.53e-17 | 15 |
pharyngeal epithelium | 1.75e-09 | 6 |
thymus | 9.54e-09 | 4 |
hemolymphoid system gland | 9.54e-09 | 4 |
thymic region | 9.54e-09 | 4 |
pharyngeal gland | 9.54e-09 | 4 |
thymus primordium | 9.54e-09 | 4 |